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BaseInfo

ncRNA ID	novel_gma_miR4629
Species	Glycine max
Class	miRNA
Genome position	Chr4:13407060-13407224 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045238;SRR2045239;SRR2045372;SRR1295522
Length	22
Mature sequence(if miRNA)	144 - CAAAGGAAAAAGAGAUCAAACC - 165
Stem-loop(if miRNA)	--C            G     AC       U   CUU         U  A          C   C     AUAG  C   UUCC    AAAGGAAAAAGA AUCAA  CUUUGAU UAG   AAUUGGUCU CG AUUAGAAUUC ACU UGAAU    CU GUC    U    |||||||||||| |||||  ||||||| |||   ||||||||| || |||||||||| ||| |||||    || |||    U    UUUCCUUUUUCU UGGUU  GAAACUA AUC   UUAACCAGA GU UAAUUUUAAG UGA ACUUA    GA UAG    A UUA            G     CU       U   CAU         C  A          U   A     ----  C   UGUU
Stem-loop sequence	CAAAGGAAAAAGAGAUCAAACCUUUGAUUUAGCUUAAUUGGUCUUCGAAUUAGAAUUCCACUCUGAAUAUAGCUCGUCUUCCUUAUUGUGAUCAGAUUCAAAGUUGAAUUUUAAUAUGCAGACCAAUUUACCUAUAUCAAAGUCUUGGUGUCUUUUUCCUUUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006595641.2	ncRNA:22   CCAAACUAGAGAAAAAGGAAAC   1   ||*||**||||||||||||||| targets:341   GGGUUCCUCUCUUUUUCCUUUG   362 Target Full Sequence	2.0	PREDICTED: Glycine max heterogeneous nuclear ribonucleoprotein 1 (LOC100788515), transcript variant X2, mRNA	heterogeneous nuclear ribonucleoprotein 1(LOC100788515)	coding protein	psRNATarget
XM_003544667.3	ncRNA:22   CCAAACUAGAGAAAAAGGAAAC   1   ||*||**||||||||||||||| targets:340   GGGUUCCUCUCUUUUUCCUUUG   361 Target Full Sequence	2.0	PREDICTED: Glycine max heterogeneous nuclear ribonucleoprotein 1 (LOC100788515), transcript variant X1, mRNA	heterogeneous nuclear ribonucleoprotein 1(LOC100788515)	coding protein	psRNATarget
XM_003520461.3	ncRNA:22   CCAAACUAGAGAAAAAGGAAAC   1   |*||||||=|||||*||||||| targets:1477   GUUUUGAUUUCUUUGUCCUUUG   1498 Target Full Sequence	2.5	PREDICTED: Glycine max alpha carbonic anhydrase 4 (LOC100306209), mRNA	alpha carbonic anhydrase 4(LOC100306209)	coding protein	psRNATarget
XM_006594138.2	ncRNA:22   CCAAACUAGAGAAAAAGGAAAC   1   *|*||||||||||||||=|||* targets:1641   UGAUUGAUCUCUUUUUCUUUUC   1662 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor VOZ1-like (LOC100784593), transcript variant X1, mRNA	transcription factor VOZ1-like(LOC100784593)	coding protein	psRNATarget
XM_003532443.3	ncRNA:22   CCAAACUAGAGAAAAAGGAAAC   1   **|||*||=||||||||||||* targets:2957   AAUUUUAUUUCUUUUUCCUUUA   2978 Target Full Sequence	3.0	PREDICTED: Glycine max leucine-rich repeat extensin-like protein 4 (LOC100814585), mRNA	leucine-rich repeat extensin-like protein 4(LOC100814585)	coding protein	psRNATarget