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BaseInfo

ncRNA ID novel_gma_miR4625
Species Glycine max
Class miRNA
Genome position Chr2:37986567-37986646 [+]
Reference genome Glycine_max_v2.0
Source SRR2045238;SRR2045371;SRR2045372;SRR1292926;SRR1295527;SRR1294475;SRR1294477
Length 24
Mature sequence(if miRNA) 57 - AGUUGUUGGAGUGGACUUGGGCCU - 80
Stem-loop(if miRNA) --   UG C       UC       C     U   CUU   C
  GCU  A UCCAUUU  AUAGCUG UGGAG GGA   GGG U
  |||  | |||||||  ||||||| ||||| |||   ||| U
  CGG  U AGGUGAG  UGUUGAU AUCUU UCU   CUC G
UC   GU C       GU       -     -   ---   A
Stem-loop sequence GCUUGACUCCAUUUUCAUAGCUGCUGGAGUGGACUUGGGCUUGACUCUCUUUCUAUAGUUGUUGGAGUGGACUUGGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771299.1
ncRNA:24   UCC--------GGGUUCAGGUGAGGUUGUUGA   1
  |||--------|=|||||=||||||||||=||
targets:5265   AGGGAGUCAAACUCAAGUUCACUCCAACAGCU   5296

2.5 PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X2, mRNA uncharacterized LOC102669491(LOC102669491) coding protein psRNATarget
XM_014771298.1
ncRNA:24   UCC--------GGGUUCAGGUGAGGUUGUUGA   1
  |||--------|=|||||=||||||||||=||
targets:4848   AGGGAGUCAAACUCAAGUUCACUCCAACAGCU   4879

2.5 PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X1, mRNA uncharacterized LOC102669491(LOC102669491) coding protein psRNATarget
XM_014771300.1
ncRNA:24   UCC--------GGGUUCAGGUGAGGUUGUUGA   1
  |||--------|=|||||=||||||||||=||
targets:4295   AGGGAGUCAAACUCAAGUUCACUCCAACAGCU   4326

2.5 PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X3, mRNA uncharacterized LOC102669491(LOC102669491) coding protein psRNATarget