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BaseInfo

ncRNA ID novel_gma_miR4609
Species Glycine max
Class miRNA
Genome position Chr1:13454689-13454749 [-]
Reference genome Glycine_max_v2.0
Source SRR2045237
Length 24
Mature sequence(if miRNA) 1 - CCACUACUGGUAGCGCCUGGCAGG - 24
Stem-loop(if miRNA) --  G     --     U       --C  A C
  UG CAGGC  UACCA UAGUGGU   GC C U
  || |||||  ||||| |||||||   || |
  AC GUCCG  AUGGU AUCACCA   CG G G
GG  G     CG     C       CCC  - G
Stem-loop sequence UGGCAGGCUACCAUUAGUGGUCGCACCUGGGGCCCCACCACUACUGGUAGCGCCUGGCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601772.2
ncRNA:24   GGACGGUCCGCGAUGGUCAUCACC   1
  |*||=||||=||*|||||||||||
targets:244   CGUGUCAGGUGCGACCAGUAGUGG   267

2.5 PREDICTED: Glycine max uncharacterized LOC100810003 (LOC100810003), transcript variant X1, mRNA uncharacterized LOC100810003(LOC100810003) coding protein psRNATarget