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BaseInfo

ncRNA ID novel_gma_miR4584
Species Glycine max
Class miRNA
Genome position Chr7:18968557-18968705 [-]
Reference genome Glycine_max_v2.0
Source SRR2045236
Length 24
Mature sequence(if miRNA) 126 - AGAAAGUGGACAUUCUAAGACGGU - 149
Stem-loop(if miRNA) --           A         -    A      A    CC      A     ACAC       G     UG A
  AGAAAGUGGAC UUCUAAGAC GGUU UUAGCU ACGA  GUCUUA AAAAU    UUUCUAA AUGGU  U A
  ||||||||||| ||||||||| |||| |||||| ||||  |||||| |||||    ||||||| |||||  | G
  UCUUUCACCUG AAGAUUCUG CCAG AAUUGA UGUU  CAGAAU UUUUA    AAAGAUU UACUA  G C
AA           A         U    -      G    AA      C     CAUA       G     GU U
Stem-loop sequence AGAAAGUGGACAUUCUAAGACGGUUAUUAGCUAACGACCGUCUUAAAAAAUACACUUUCUAAGAUGGUUGUAAGCUGUGAUCAUGUUAGAAAAUACAUUUUCUAAGACAAUUGUGAGUUAAGACCUGUCUUAGAAAGUCCACUUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552707.3
ncRNA:24   UGGCAGAAUCUUACAGGUGAAAGA   1
  *||*|=|||||||*||||||||||
targets:349   UCCCUUUUAGAAUAUCCACUUUCU   372

2.5 PREDICTED: Glycine max auxin-responsive protein SAUR41-like (LOC100777217), mRNA auxin-responsive protein SAUR41-like(LOC100777217) coding protein psRNATarget