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BaseInfo

ncRNA ID	novel_gma_miR4580
Species	Glycine max
Class	miRNA
Genome position	Chr6:35722943-35723119 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045236
Length	22
Mature sequence(if miRNA)	156 - UGCUUCCACAUUGUUUUGACUA - 177
Stem-loop(if miRNA)	--        CA                  AUA  CUC                     U                AC  --UAGG  C   UGCUUCCA  UUGUUUUGACUACCCACA   AC   ACAAAUUUUACAAUAUACCCC GGUUGUGGCUAUUCCU  CA      AC U   ||||||||  ||||||||||||||||||   ||   ||||||||||||||||||||| ||||||||||||||||  ||      || A   ACGAAGGU  AACAAAAUUGAUGGGUGU   UG   UGUUUAAAAUGUUAUAUGGGG UCAACACCGAUAAGGA  GU      UG U AC        AC                  GAC  AAC                     U                GU  UUAAAA  U
Stem-loop sequence	UGCUUCCACAUUGUUUUGACUACCCACAAUAACCUCACAAAUUUUACAAUAUACCCCUGGUUGUGGCUAUUCCUACCAUAGGACCUAUUGUAAAAUUUGUGAGGAAUAGCCACAACUUGGGGUAUAUUGUAAAAUUUGUCAAGUCAGUGUGGGUAGUUAAAACAACAUGGAAGCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006588823.2	ncRNA:22   AUCAGUUUUGUUACACCUUCGU   1   *|**|||||||||||||||||* targets:1216   CAACCAAAACAAUGUGGAAGCU   1237 Target Full Sequence	2.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF2A-like (LOC100802025), transcript variant X1, mRNA	E3 ubiquitin-protein ligase RHF2A-like(LOC100802025)	coding protein	psRNATarget
XM_006588825.2	ncRNA:22   AUCAGUUUUGUUACACCUUCGU   1   *|**|||||||||||||||||* targets:1217   CAACCAAAACAAUGUGGAAGCU   1238 Target Full Sequence	2.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF2A-like (LOC100802025), transcript variant X2, mRNA	E3 ubiquitin-protein ligase RHF2A-like(LOC100802025)	coding protein	psRNATarget
AK244490.1	ncRNA:22   AUCAGUUUUGUUACACCUUCGU   1   *|**||||=||||||||||||* targets:1188   CAACCAAAGCAAUGUGGAAGCU   1209 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-05-A09	NA	coding protein	psRNATarget
XM_014768317.1	ncRNA:22   AUCAGUUUUGUUACACCUUCGU   1   *|**||||=||||||||||||* targets:1230   CAACCAAAGCAAUGUGGAAGCU   1251 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF2A (LOC100803582), transcript variant X1, mRNA	E3 ubiquitin-protein ligase RHF2A(LOC100803582)	coding protein	psRNATarget
XM_003519053.3	ncRNA:22   AUCAGUUUUGUUACACCUUCGU   1   *|**||||=||||||||||||* targets:1236   CAACCAAAGCAAUGUGGAAGCU   1257 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase RHF2A (LOC100803582), transcript variant X2, mRNA	E3 ubiquitin-protein ligase RHF2A(LOC100803582)	coding protein	psRNATarget