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BaseInfo

ncRNA ID novel_gma_miR4576
Species Glycine max
Class miRNA
Genome position Chr5:7314359-7314513 [-]
Reference genome Glycine_max_v2.0
Source SRR2045236
Length 21
Mature sequence(if miRNA) 135 - AUUUGUUCUACCGGAAGAACC - 155
Stem-loop(if miRNA) --        UA          C         ------           G     C     GCUUC    GAAGAAGGUUCUU
  AUUUGUUC  CCGGAAGAAC UUCUUUCGG      UACCGGAAGAA UUCUU CGGUA     UCCA             C
  ||||||||  |||||||||| |||||||||      ||||||||||| ||||| |||||     ||||
  UAAACAAG  GGCCUUCUUG AAGAAAGCC      AUGGCUUUCUU AAGAA GUCAU     CUUG             U
GU        UA          U         UCUUCG           G     U     -----    UUAAACAAGAAGG
Stem-loop sequence AUUUGUUCUACCGGAAGAACCUUCUUUCGGUACCGGAAGAAGUUCUUCCGGUAGCUUCUCCAGAAGAAGGUUCUUCUGGAAGAACAAAUUGUUCUACUGUAAGAAGUUCUUUCGGUAGCUUCUCCGAAAGAAUGUUCUUCCGGAUGAACAAAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531884.3
ncRNA:21   CCAAGAAGGCCAUCUUGUUUA   1
  *|||*|*|||||||||||||*
targets:841   UGUUGUGCCGGUAGAACAAAG   861

3.0 PREDICTED: Glycine max DNA-directed RNA polymerase 1B, mitochondrial-like (LOC100814762), mRNA DNA-directed RNA polymerase 1B, mitochondrial-like(LOC100814762) coding protein psRNATarget