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BaseInfo

ncRNA ID novel_gma_miR4546
Species Glycine max
Class miRNA
Genome position Chr10:8537274-8537326 [-]
Reference genome Glycine_max_v2.0
Source SRR2045236
Length 21
Mature sequence(if miRNA) 33 - AUUUCUUGAGCUCUUGGACCU - 53
Stem-loop(if miRNA) ---A UU    -     UUG        G
    U  CUUG AGCUC   GACCUGCU A
    |  |||| |||||   ||||||||
    A  GAGU UCGAG   UUGGAUGA U
CUUA GG    G     ---        C
Stem-loop sequence AUUUCUUGAGCUCUUGGACCUGCUGAUCAGUAGGUUGAGCUGUGAGGGAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006595245.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*||||||||||||||||||*
targets:677   AAGUCCAAGAGCUCAAGAAAA   697

1.0 PREDICTED: Glycine max uncharacterized LOC102667235 (LOC102667235), mRNA uncharacterized LOC102667235(LOC102667235) coding protein psRNATarget
XM_014771464.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*||=|||||||||||||||*
targets:977   AAGUUCAAGAGCUCAAGAAAG   997

2.0 PREDICTED: Glycine max uncharacterized LOC106797232 (LOC106797232), mRNA uncharacterized LOC106797232(LOC106797232) coding protein psRNATarget
XM_014771570.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*|||||=||||||||||||*
targets:977   AAGUCCAGGAGCUCAAGAAAA   997

2.0 PREDICTED: Glycine max uncharacterized LOC106797298 (LOC106797298), mRNA uncharacterized LOC106797298(LOC106797298) coding protein psRNATarget
XM_014766608.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*||=|||||||||||||||*
targets:2912   AAGUUCAAGAGCUCAAGAAAG   2932

2.0 PREDICTED: Glycine max uncharacterized LOC106795734 (LOC106795734), mRNA uncharacterized LOC106795734(LOC106795734) coding protein psRNATarget
XM_014771444.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*||=|||||||||||||||*
targets:4914   AAGUUCAAGAGCUCAAGAAAG   4934

2.0 PREDICTED: Glycine max uncharacterized LOC106794311 (LOC106794311), mRNA uncharacterized LOC106794311(LOC106794311) coding protein psRNATarget
XM_006596719.1
ncRNA:21   UCCAGGUUCUCGAGUUCUUUA   1
  |*||||||*|||||||||||*
targets:515   AAGUCCAACAGCUCAAGAAAA   535

2.5 PREDICTED: Glycine max uncharacterized LOC102662462 (LOC102662462), mRNA uncharacterized LOC102662462(LOC102662462) coding protein psRNATarget