| ncRNA ID | novel_gma_miR4540 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr8:27429754-27429972 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR1292924;SRR1295530;SRR1295531 |
| Length | 24 |
| Mature sequence(if miRNA) | 196 - UAAGGACAAAUAGUUAAGAUAGUU - 219 |
| Stem-loop(if miRNA) |
-- U C - AA C G U UG -AUU CC C CU UUUUAACUAUUUGUCCUU AGAUUUUACUGUUUUUUUUU CUAAUAUGUAAAUAUAAAU UAUAAGG UAU GC UA GACAUGGUC UUUAC CUAA A || |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||| || || ||||||||| ||||| |||| A GA AGAAUUGAUAAACAGGAA UCUAAAAUGACAAAGAAAAA GAUUAUACAUUUAUAUUUA AUAUUCC AUA CG AU UUGUACCAG AAAUG GAUU U UU U U C CC C G C UU GUAU AA C |
| Stem-loop sequence | CUUUUUUAACUAUUUGUCCUUCAGAUUUUACUGUUUUUUUUUCUAAUAUGUAAAUAUAAAUAAUAUAAGGCUAUGGCUUAUGGACAUGGUCAUUUUUACCCCUAACAAUCUUAGAAGUAAAUAUGGACCAUGUUUUUACGCGAUACCCUUAUACCAUUUAUAUUUACAUAUUAGCAAAAAGAAACAGUAAAAUCUUAAGGACAAAUAGUUAAGAUAGUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006593805.2 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100783198 (LOC100783198), transcript variant X2, mRNA | uncharacterized LOC100783198(LOC100783198) | coding protein | psRNATarget | |||||||||
| XM_006593804.2 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100783198 (LOC100783198), transcript variant X1, mRNA | uncharacterized LOC100783198(LOC100783198) | coding protein | psRNATarget |