ncRNA ID | novel_gma_miR4538 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:47636643-47636740 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045236 |
Length | 21 |
Mature sequence(if miRNA) | 78 - AUUUGUUCUACCGGAAGAACC - 98 |
Stem-loop(if miRNA) |
--        UA         CC              GC         A   AUUUGUUC  CCGGAAGAA  CUUCUUCUGGAGAA  UACCGGAAG A   ||||||||  |||||||||  ||||||||||||||  ||||||||| G   UAAACAAG  GGCCUUCUU  GAAGAAGACCUCUU  AUGGCCUUC U GU        UA         -A              AA         U |
Stem-loop sequence | AUUUGUUCUACCGGAAGAACCCUUCUUCUGGAGAAGCUACCGGAAGAAGUUCUUCCGGUAAAUUCUCCAGAAGAAGAUUCUUCCGGAUGAACAAAUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531884.3 |
|
3.0 | PREDICTED: Glycine max DNA-directed RNA polymerase 1B, mitochondrial-like (LOC100814762), mRNA | DNA-directed RNA polymerase 1B, mitochondrial-like(LOC100814762) | coding protein | psRNATarget |