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BaseInfo

ncRNA ID novel_gma_miR4538
Species Glycine max
Class miRNA
Genome position Chr15:47636643-47636740 [-]
Reference genome Glycine_max_v2.0
Source SRR2045236
Length 21
Mature sequence(if miRNA) 78 - AUUUGUUCUACCGGAAGAACC - 98
Stem-loop(if miRNA) --        UA         CC              GC         A
  AUUUGUUC  CCGGAAGAA  CUUCUUCUGGAGAA  UACCGGAAG A
  ||||||||  |||||||||  ||||||||||||||  ||||||||| G
  UAAACAAG  GGCCUUCUU  GAAGAAGACCUCUU  AUGGCCUUC U
GU        UA         -A              AA         U
Stem-loop sequence AUUUGUUCUACCGGAAGAACCCUUCUUCUGGAGAAGCUACCGGAAGAAGUUCUUCCGGUAAAUUCUCCAGAAGAAGAUUCUUCCGGAUGAACAAAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531884.3
ncRNA:21   CCAAGAAGGCCAUCUUGUUUA   1
  *|||*|*|||||||||||||*
targets:841   UGUUGUGCCGGUAGAACAAAG   861

3.0 PREDICTED: Glycine max DNA-directed RNA polymerase 1B, mitochondrial-like (LOC100814762), mRNA DNA-directed RNA polymerase 1B, mitochondrial-like(LOC100814762) coding protein psRNATarget