ncRNA ID | novel_gma_miR4528 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:10054621-10054821 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045235 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCGACUAGGGUUUGUUUGGCUGAC - 24 |
Stem-loop(if miRNA) |
--UC      -   -  G           C   C    G   UUUCGAA  A           G        -    AAC  CAGCCUAAAAAAUCCUAGCAA     GACUAG GGU UU UUUGGCUGACA UGG UAGG UCU       UG CAUUGAUCAAG CUAUUUUU AGCC   GU                     G     |||||| ||| || ||||||||||| ||| |||| |||       || ||||||||||| |||||||| ||||   ||                     C     CUGGUU CUA AA AAGCCGACUGU GCC AUCC AGA       AC GUAGCUGGUUC GAUAAAAA UCGG   AU                     G GCAA      A   C  G           A   C    A   -UAACCA  C           -        A    -CU  AAUCCAUCUAAAAAAACAGUU |
Stem-loop sequence | UCGACUAGGGUUUGUUUGGCUGACACUGGCUAGGGUCUUUUCGAAUGACAUUGAUCAAGGCUAUUUUUAGCCAACGUCAGCCUAAAAAAUCCUAGCAAGCGUUGACAAAAAAAUCUACCUAAUAUCGGCUAAAAAAUAGCUUGGUCGAUGCCAACCAAUAGAACCUACCCGAUGUCAGCCGAAGAACAUCAUUGGUCAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003546197.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100801763 (LOC100801763), mRNA | uncharacterized LOC100801763(LOC100801763) | coding protein | psRNATarget |