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BaseInfo

ncRNA ID novel_gma_miR4514
Species Glycine max
Class miRNA
Genome position Chr4:2993850-2993949 [+]
Reference genome Glycine_max_v2.0
Source SRR2045235
Length 23
Mature sequence(if miRNA) 1 - UCCUUAUGACCGUCUUAGAACCC - 23
Stem-loop(if miRNA) --  CU  U             CCC       -AAAUAACAAUUU    GA
  UC  UA GACCGUCUUAGAA   GCGACGU             UAAU  C
  ||  || |||||||||||||   |||||||             ||||  A
  AG  AU UUGGCGGAAUCUU   UGUUGCG             AUUA  U
CA  AC  C             --U       CCACCAUAAAAAC    AU
Stem-loop sequence UCCUUAUGACCGUCUUAGAACCCGCGACGUAAAUAACAAUUUUAAUGACAUUAAUUACAAAAAUACCACCGCGUUGUUUUCUAAGGCGGUUCUACAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766623.1
ncRNA:23   CCC--AAGAUUCUGCCAGUAUUCCU   1
  *||--|||||||||||||=||||||
targets:3160   UGGCAUUCUAAGACGGUCGUAAGGA   3184

1.5 PREDICTED: Glycine max putative multidrug resistance protein (LOC106795741), mRNA putative multidrug resistance protein(LOC106795741) coding protein psRNATarget
XM_006595284.2
ncRNA:23   CCC--AAGAUUCUGCCAGUAUUCCU   1
  *||--|||||||||||||=||||||
targets:3035   UGGCAUUCUAAGACGGUCGUAAGGA   3059

1.5 PREDICTED: Glycine max putative multidrug resistance protein (LOC102669282), mRNA putative multidrug resistance protein(LOC102669282) coding protein psRNATarget