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BaseInfo

ncRNA ID novel_gma_miR4507
Species Glycine max
Class miRNA
Genome position Chr17:9769230-9769292 [-]
Reference genome Glycine_max_v2.0
Source SRR2045235;SRR2045376
Length 24
Mature sequence(if miRNA) 40 - GGAGAGGUUCUAGAAAAUUCUGGA - 63
Stem-loop(if miRNA) --  A  G                GA     C
  GG GA GUUCUAGAAAAUUCUG  GCUUU U
  || || ||||||||||||||||  ||||| G
  UC CU CAAGAUCUUUUAAGAU  UGAAA G
GG  -  G                -G     A
Stem-loop sequence GGAGAGGUUCUAGAAAAUUCUGGAGCUUUCUGGAAAAGUGUAGAAUUUUCUAGAACGUCCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552052.3
ncRNA:24   AGGUCUUAAAAGAUCUUGGAGAGG   1
  **|||||*|*|||||||||||||=
targets:27   AACAGAACUCUCUAGAACCUCUCU   50

3.0 PREDICTED: Glycine max peptidyl-prolyl cis-trans isomerase FKBP62-like (LOC100781128), transcript variant X1, mRNA peptidyl-prolyl cis-trans isomerase FKBP62-like(LOC100781128) coding protein psRNATarget
XM_014770935.1
ncRNA:24   AGGUCUUAAAAGAUCUUGGAGAGG   1
  **|||||*|*|||||||||||||=
targets:27   AACAGAACUCUCUAGAACCUCUCU   50

3.0 PREDICTED: Glycine max peptidyl-prolyl cis-trans isomerase FKBP62-like (LOC100781128), transcript variant X2, mRNA peptidyl-prolyl cis-trans isomerase FKBP62-like(LOC100781128) coding protein psRNATarget