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BaseInfo

ncRNA ID	novel_gma_miR4496
Species	Glycine max
Class	miRNA
Genome position	Chr6:14752148-14752349 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045234
Length	24
Mature sequence(if miRNA)	179 - GACCGUUGACAAGUGACUUGGCUG - 202
Stem-loop(if miRNA)	--        A       --C     U C         CAUCC                                       AUG   ACUCCAUGAAAGAUG   GACCGUUG CAAGUGA   UUGGC G CACGUGUCA     UUAUUGGAUGAUGACUGUUACGUGUCAUGUUCUGAUUGG   UCA               A   |||||||| |||||||   ||||| | |||||||||     |||||||||||||||||||||||||||||||||||||||   |||               A   CUGGCAAU GUUUACU   AACUG C GUGCACAGU     AAUAAUCUACUACUGACGGUGUACAGUACAAGACUAACC   UUA               A AA        -       UAC     - A         ACAAA                                       -AG   CUUUUGUUAUUAUGU
Stem-loop sequence	GACCGUUGACAAGUGACUUGGCUGCCACGUGUCACAUCCUUAUUGGAUGAUGACUGUUACGUGUCAUGUUCUGAUUGGAUGUCAACUCCAUGAAAGAUGAAAUGUAUUAUUGUUUUCAUUGACCAAUCAGAACAUGACAUGUGGCAGUCAUCAUCUAAUAAAAACAUGACACGUGACGUCAACAUUCAUUUGUAACGGUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763002.1	ncRNA:24   GUCGGUUCAGUGAACAGUUGCCAG   1   *|***||||||||||||||=|||* targets:277   AAAGAAAGUCACUUGUCAAUGGUG   300 Target Full Sequence	2.5	PREDICTED: Glycine max putative cyclic nucleotide-gated ion channel 15 (LOC100815543), transcript variant X4, mRNA	putative cyclic nucleotide-gated ion channel 15(LOC100815543)	coding protein	psRNATarget
XM_003536940.3	ncRNA:24   GUCGGUUCAGUGAACAGUUGCCAG   1   *|***||||||||||||||=|||* targets:276   AAAGAAAGUCACUUGUCAAUGGUG   299 Target Full Sequence	2.5	PREDICTED: Glycine max putative cyclic nucleotide-gated ion channel 15 (LOC100815543), transcript variant X1, mRNA	putative cyclic nucleotide-gated ion channel 15(LOC100815543)	coding protein	psRNATarget
XM_006588724.2	ncRNA:24   GUCGGUUCAGUGAACAGUUGCCAG   1   *|***||||||||||||||=|||* targets:277   AAAGAAAGUCACUUGUCAAUGGUG   300 Target Full Sequence	2.5	PREDICTED: Glycine max putative cyclic nucleotide-gated ion channel 15 (LOC100815543), transcript variant X2, mRNA	putative cyclic nucleotide-gated ion channel 15(LOC100815543)	coding protein	psRNATarget
XM_006588723.2	ncRNA:24   GUCGGUUCAGUGAACAGUUGCCAG   1   *|***||||||||||||||=|||* targets:315   AAAGAAAGUCACUUGUCAAUGGUG   338 Target Full Sequence	2.5	PREDICTED: Glycine max putative cyclic nucleotide-gated ion channel 15 (LOC100815543), transcript variant X3, mRNA	putative cyclic nucleotide-gated ion channel 15(LOC100815543)	coding protein	psRNATarget