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BaseInfo

ncRNA ID novel_gma_miR4494
Species Glycine max
Class miRNA
Genome position Chr3:36311543-36311636 [+]
Reference genome Glycine_max_v2.0
Source SRR2045234
Length 24
Mature sequence(if miRNA) 71 - UGAGGACGAGGAUGAGGAUAACAA - 94
Stem-loop(if miRNA) --CGA     UG  A      A     AC -UA    AA A      A
     GUUCU  UU UCGUCC UCAUU  C   CUCA  U CGUGAC U
     |||||  || |||||| |||||  |   ||||  | ||||||
     UAGGA  AG AGCAGG AGUAA  G   GAGU  A GCACUG G
AACAA     GU  G      -     GA UAG    AG A      A
Stem-loop sequence CGAGUUCUUGUUAUCGUCCAUCAUUACCUACUCAAAUACGUGACAUGAGUCACGAAGAUGAGGAUGAGAAUGAGGACGAGGAUGAGGAUAACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585277.2
ncRNA:24   AACAAUAGGAGUAGGAGCAGGAGU   1
  |**|*||=|||||||||||||||=
targets:208   UCCUAAUUCUCAUCCUCGUCCUCG   231

2.0 PREDICTED: Glycine max sister chromatid cohesion 1 protein 3 (LOC102661287), transcript variant X1, mRNA sister chromatid cohesion 1 protein 3(LOC102661287) coding protein psRNATarget
XM_014778975.1
ncRNA:24   AACAAUAGGAGUAGGAGCAGGAGU   1
  |**|*||=|||||||||||||||=
targets:213   UCCUAAUUCUCAUCCUCGUCCUCG   236

2.0 PREDICTED: Glycine max sister chromatid cohesion 1 protein 3 (LOC102661287), transcript variant X2, mRNA sister chromatid cohesion 1 protein 3(LOC102661287) coding protein psRNATarget
AK244969.1
ncRNA:24   AACAAUAGGAGUAGGAGCAGGAGU   1
  ****||||**|||||||||||||*
targets:839   CCAGUAUCACCAUCCUCGUCCUCU   862

3.0 Glycine max cDNA, clone: GMFL01-18-A13 NA coding protein psRNATarget