ncRNA ID | novel_gma_miR4494 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:36311543-36311636 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045234 |
Length | 24 |
Mature sequence(if miRNA) | 71 - UGAGGACGAGGAUGAGGAUAACAA - 94 |
Stem-loop(if miRNA) |
--CGA     UG  A      A     AC -UA    AA A      A      GUUCU  UU UCGUCC UCAUU  C   CUCA  U CGUGAC U      |||||  || |||||| |||||  |   ||||  | ||||||      UAGGA  AG AGCAGG AGUAA  G   GAGU  A GCACUG G AACAA     GU  G      -     GA UAG    AG A      A |
Stem-loop sequence | CGAGUUCUUGUUAUCGUCCAUCAUUACCUACUCAAAUACGUGACAUGAGUCACGAAGAUGAGGAUGAGAAUGAGGACGAGGAUGAGGAUAACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006585277.2 |
|
2.0 | PREDICTED: Glycine max sister chromatid cohesion 1 protein 3 (LOC102661287), transcript variant X1, mRNA | sister chromatid cohesion 1 protein 3(LOC102661287) | coding protein | psRNATarget | |||||||||
XM_014778975.1 |
|
2.0 | PREDICTED: Glycine max sister chromatid cohesion 1 protein 3 (LOC102661287), transcript variant X2, mRNA | sister chromatid cohesion 1 protein 3(LOC102661287) | coding protein | psRNATarget | |||||||||
AK244969.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-18-A13 | NA | coding protein | psRNATarget |