ncRNA ID | novel_gma_miR4483 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:1745325-1745444 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045234 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUGGAUAAUGAUUGUCACGUGUC - 24 |
Stem-loop(if miRNA) |
--       A   AU     C          C     AAAU    ACUCC      --     AA   AUUGGAU AUG  UGUCA GUGUCAUGUU UGAUU    GUCA     AUGAAA  GAUAG  U   ||||||| |||  ||||| |||||||||| |||||    ||||     ||||||  |||||   UAAUCUA UAC  ACAGU CACAGUACAA ACUAA    CAGU     UACUUU  UUGUU  G AA       C   CG     A          C     ---C    -----      UG     AA |
Stem-loop sequence | AUUGGAUAAUGAUUGUCACGUGUCAUGUUCUGAUUAAAUGUCAACUCCAUGAAAGAUAGAAUGAAUUGUUGUUUUCAUUGACCAAUCACAACAUGACACAUGACAGCCAUCAUCUAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK245140.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-21-P01 | NA | coding protein | psRNATarget | |||||||||
XM_006602607.2 |
|
2.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |