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BaseInfo

ncRNA ID novel_gma_miR4483
Species Glycine max
Class miRNA
Genome position Chr10:1745325-1745444 [+]
Reference genome Glycine_max_v2.0
Source SRR2045234
Length 24
Mature sequence(if miRNA) 1 - AUUGGAUAAUGAUUGUCACGUGUC - 24
Stem-loop(if miRNA) --       A   AU     C          C     AAAU    ACUCC      --     AA
  AUUGGAU AUG  UGUCA GUGUCAUGUU UGAUU    GUCA     AUGAAA  GAUAG  U
  ||||||| |||  ||||| |||||||||| |||||    ||||     ||||||  |||||
  UAAUCUA UAC  ACAGU CACAGUACAA ACUAA    CAGU     UACUUU  UUGUU  G
AA       C   CG     A          C     ---C    -----      UG     AA
Stem-loop sequence AUUGGAUAAUGAUUGUCACGUGUCAUGUUCUGAUUAAAUGUCAACUCCAUGAAAGAUAGAAUGAAUUGUUGUUUUCAUUGACCAAUCACAACAUGACACAUGACAGCCAUCAUCUAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245140.1
ncRNA:24   CUGUGCACUGUUAGUAAUAGGUUA   1
  ||||||||||*=||||||||||||
targets:1591   GACACGUGACCGUCAUUAUCCAAU   1614

2.5 Glycine max cDNA, clone: GMFL01-21-P01 NA coding protein psRNATarget
XM_006602607.2
ncRNA:24   CUGUGCACUGUUAGUAAUAGGUUA   1
  |||||*||||||*|||||||||||
targets:649   GACACAUGACAAACAUUAUCCAAU   672

2.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget