ncRNA ID | novel_gma_miR4478 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:55385929-55385988 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294487 |
Length | 20 |
Mature sequence(if miRNA) | 41 - AAAAUGGGCUGGUGCUUGGU - 60 |
Stem-loop(if miRNA) |
--  U      --    GC     G   AAC   CA GCACCA  UCAU  UUUUU ACC   A   || ||||||  ||||  ||||| |||   A   GU CGUGGU  GGUA  AAGGA UGG   C UG  U      CG    -A     G   CCA |
Stem-loop sequence | CAUGCACCAUCAUGCUUUUUGACCAACAACACCGGUGAGGAAAAUGGGCUGGUGCUUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006603423.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102659954 (LOC102659954), mRNA | uncharacterized LOC102659954(LOC102659954) | coding protein | psRNATarget | |||||||||
XM_014761665.1 |
|
2.5 | PREDICTED: Glycine max RNA-directed DNA polymerase homolog (LOC106794399), mRNA | RNA-directed DNA polymerase homolog(LOC106794399) | coding protein | psRNATarget |