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BaseInfo

ncRNA ID	novel_gma_miR4469
Species	Glycine max
Class	miRNA
Genome position	Chr10:11422999-11423154 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294487
Length	21
Mature sequence(if miRNA)	1 - AUACUGAGACAUUGACCACCG - 21
Stem-loop(if miRNA)	-AUA    -           -  GUGU  GA    AGA        CAU   ---  AUGUAGAGCGGGAAAUCUGGAUUA     CUGA GACAUUGACCA CC    GC  UUUC   GAGGUCUU   GCU   UU                        A     |||| ||||||||||| ||    ||  ||||   ||||||||   |||   ||                        A     GACU CUGUAACUGGU GG    CG  AAAG   CUCCGGAA   GUC   UG                        G AAUA    A           A  GUUU  -A    -AA        -UA   CAA  UACCCUACGGUGACACAAGCCUCA
Stem-loop sequence	AUACUGAGACAUUGACCACCGUGUGCGAUUUCAGAGAGGUCUUCAUGCUUUAUGUAGAGCGGGAAAUCUGGAUUAAAGACUCCGAACACAGUGGCAUCCCAUGUAACCUGAUAAGGCCUCAAGAAAAGCUUUGGGAUGGUCAAUGUCAUCAGAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766878.1	ncRNA:21   GCCACCAGUUACAGAGUCAUA   1   =||||*|||||||||=||||| targets:2037   UGGUGAUCAAUGUCUUAGUAU   2057 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102667238 (LOC102667238), transcript variant X1, mRNA	uncharacterized LOC102667238(LOC102667238)	coding protein	psRNATarget
XM_014761988.1	ncRNA:21   GCCACCAGUUACAGAGUCAUA   1   |||*||||||||||||||*|| targets:1202   CGGGGGUCAAUGUCUCAGCAU   1222 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X1, mRNA	uncharacterized LOC106794548(LOC106794548)	coding protein	psRNATarget
XM_014761990.1	ncRNA:21   GCCACCAGUUACAGAGUCAUA   1   |||*||||||||||||||*|| targets:1202   CGGGGGUCAAUGUCUCAGCAU   1222 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X2, mRNA	uncharacterized LOC106794548(LOC106794548)	coding protein	psRNATarget
XM_014774774.1	ncRNA:21   GCCACCAGUUACAGAGUCAUA   1   =|*|||||||||||||||*|| targets:465   UGAUGGUCAAUGUCUCAGCAU   485 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102666913 (LOC102666913), transcript variant X1, mRNA	uncharacterized LOC102666913(LOC102666913)	coding protein	psRNATarget
XM_003550383.2	ncRNA:21   GCCACCAGUUACAGAGUCAUA   1   **|||*||||||||||||*|| targets:1388   AAGUGAUCAAUGUCUCAGGAU   1408 Target Full Sequence	2.5	PREDICTED: Glycine max kinesin-related protein 12-like (LOC100776119), mRNA	kinesin-related protein 12-like(LOC100776119)	coding protein	psRNATarget