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BaseInfo

ncRNA ID novel_gma_miR4463
Species Glycine max
Class miRNA
Genome position Chr17:10614530-10614601 [-]
Reference genome Glycine_max_v2.0
Source SRR1294487;SRR1292927
Length 21
Mature sequence(if miRNA) 52 - AGGACAACUCUUCUUUGGCGC - 72
Stem-loop(if miRNA) --     AA                 ------      G
  AGGAC  CUCUUCUUUGGCGCAUC      AUUUGG A
  |||||  |||||||||||||||||      ||||||
  UCCUG  GAGAAGAAACCGUGUAG      UGAGCU A
UG     GA                 CGUGUG      C
Stem-loop sequence AGGACAACUCUUCUUUGGCGCAUCAUUUGGGAACUCGAGUGUGUGCGAUGUGCCAAAGAAGAGAGGUCCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583982.2
ncRNA:21   CGCGGUUUCUUCUCAACAGGA   1
  |=|*||=|||||||||||||*
targets:5081   GUGGCAGAGAAGAGUUGUCCA   5101

3.0 PREDICTED: Glycine max chromatin structure-remodeling complex protein SYD-like (LOC100815262), transcript variant X1, mRNA chromatin structure-remodeling complex protein SYD-like(LOC100815262) coding protein psRNATarget
XM_006583983.2
ncRNA:21   CGCGGUUUCUUCUCAACAGGA   1
  |=|*||=|||||||||||||*
targets:5076   GUGGCAGAGAAGAGUUGUCCA   5096

3.0 PREDICTED: Glycine max chromatin structure-remodeling complex protein SYD-like (LOC100815262), transcript variant X2, mRNA chromatin structure-remodeling complex protein SYD-like(LOC100815262) coding protein psRNATarget
XM_006583984.2
ncRNA:21   CGCGGUUUCUUCUCAACAGGA   1
  |=|*||=|||||||||||||*
targets:5021   GUGGCAGAGAAGAGUUGUCCA   5041

3.0 PREDICTED: Glycine max chromatin structure-remodeling complex protein SYD-like (LOC100815262), transcript variant X3, mRNA chromatin structure-remodeling complex protein SYD-like(LOC100815262) coding protein psRNATarget