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BaseInfo

ncRNA ID	novel_gma_miR4455
Species	Glycine max
Class	miRNA
Genome position	Chr6:37495448-37495553 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045232
Length	24
Mature sequence(if miRNA)	83 - UUGUUGGGGAGAUUCAAGGGGUAC - 106
Stem-loop(if miRNA)	--              AG   ACUUU   AAUAAAAUUUAUUUUCAUUUUUAAUUG   AUCUCUUGAAUUUU  CCC     UAG                           U   ||||||||||||||  |||     |||                           A   UGGGGAACUUAGAG  GGG     UUG                           U CA              --   -----   UUAAUGUUCAGGUUUUUAUUCAUAUUU
Stem-loop sequence	AUCUCUUGAAUUUUAGCCCACUUUUAGAAUAAAAUUUAUUUUCAUUUUUAAUUGUAUUUUAUACUUAUUUUUGGACUUGUAAUUGUUGGGGAGAUUCAAGGGGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006599890.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||||||*||||||||||||||| targets:171   GUACCCCUCGAAUCUCCCCAACAA   194 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102663510 (LOC102663510), mRNA	uncharacterized LOC102663510(LOC102663510)	coding protein	psRNATarget
XM_014776461.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||||||*||||||||||||||| targets:2044   GUACCCCUCGAAUCUCCCCAACAA   2067 Target Full Sequence	1.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X2, mRNA	zinc finger CCCH domain-containing protein 38-like(LOC100803151)	coding protein	psRNATarget
XM_014776460.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||||||*||||||||||||||| targets:2044   GUACCCCUCGAAUCUCCCCAACAA   2067 Target Full Sequence	1.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X1, mRNA	zinc finger CCCH domain-containing protein 38-like(LOC100803151)	coding protein	psRNATarget
XM_006599890.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||||||*||||||||||||||= targets:323   GUACCCCUCGAAUCUCCCCAACAG   346 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102663510 (LOC102663510), mRNA	uncharacterized LOC102663510(LOC102663510)	coding protein	psRNATarget
XM_014777225.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||=|||*|||*||||||||||| targets:2406   GUACUCCUCGAACCUCCCCAACAA   2429 Target Full Sequence	2.5	PREDICTED: Glycine max J domain-containing protein required for chloroplast accumulation response 1-like (LOC100820241), transcript variant X2, mRNA	J domain-containing protein required for chloroplast accumulation response 1-like(LOC100820241)	coding protein	psRNATarget
XM_014777226.1	ncRNA:24   CAUGGGGAACUUAGAGGGGUUGUU   1   ||||=|||*|||*||||||||||| targets:2547   GUACUCCUCGAACCUCCCCAACAA   2570 Target Full Sequence	2.5	PREDICTED: Glycine max J domain-containing protein required for chloroplast accumulation response 1-like (LOC100820241), transcript variant X3, mRNA	J domain-containing protein required for chloroplast accumulation response 1-like(LOC100820241)	coding protein	psRNATarget
XM_006590433.2	ncRNA:24   CAU--GGGGAACUUAGAGGGGUUGUU   1   *||--==||*||||||||=||||||| targets:1245   CUAACUUCCAUGAAUCUCUCCAACAA   1270 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive receptor kinase At4g23740 (LOC100780435), transcript variant X2, mRNA	probable inactive receptor kinase At4g23740(LOC100780435)	coding protein	psRNATarget
XM_014763769.1	ncRNA:24   CAU--GGGGAACUUAGAGGGGUUGUU   1   *||--==||*||||||||=||||||| targets:1254   CUAACUUCCAUGAAUCUCUCCAACAA   1279 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive receptor kinase At4g23740 (LOC100780435), transcript variant X1, mRNA	probable inactive receptor kinase At4g23740(LOC100780435)	coding protein	psRNATarget