ncRNA ID | novel_gma_miR4453 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:29275199-29275312 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045232 |
Length | 24 |
Mature sequence(if miRNA) | 91 - AACCCACUCCAACCCAACCUGUUU - 114 |
Stem-loop(if miRNA) |
--      C            --U     UGAUCCA  A U             --    AAA   AACCCA UCCAACCCAACC   GUUUA       GU G GUUGGGUCGGGUU  UGCA   A   |||||| ||||||||||||   |||||       || | |||||||||||||  ||||   UUGGGU AGGUUGGGUUGG   UAAAU       UA C CAACCCAGCCCAA  ACGU   A GU      U            UUU     -------  C -             AC    GAA |
Stem-loop sequence | AACCCACUCCAACCCAACCUGUUUAUGAUCCAGUAGUGUUGGGUCGGGUUUGCAAAAAAAAGUGCACAAACCCGACCCAACCCAUUAAAUUUUGGUUGGGUUGGAUUGGGUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003553710.3 |
|
1.0 | PREDICTED: Glycine max ammonium transporter 3 member 2-like (LOC100782944), mRNA | ammonium transporter 3 member 2-like(LOC100782944) | coding protein | psRNATarget | |||||||||
XM_003555392.3 |
|
2.5 | PREDICTED: Glycine max lysM domain receptor-like kinase 3 (LOC100820374), mRNA | lysM domain receptor-like kinase 3(LOC100820374) | coding protein | psRNATarget |