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BaseInfo

ncRNA ID novel_gma_miR4453
Species Glycine max
Class miRNA
Genome position Chr5:29275199-29275312 [-]
Reference genome Glycine_max_v2.0
Source SRR2045232
Length 24
Mature sequence(if miRNA) 91 - AACCCACUCCAACCCAACCUGUUU - 114
Stem-loop(if miRNA) --      C            --U     UGAUCCA  A U             --    AAA
  AACCCA UCCAACCCAACC   GUUUA       GU G GUUGGGUCGGGUU  UGCA   A
  |||||| ||||||||||||   |||||       || | |||||||||||||  ||||
  UUGGGU AGGUUGGGUUGG   UAAAU       UA C CAACCCAGCCCAA  ACGU   A
GU      U            UUU     -------  C -             AC    GAA
Stem-loop sequence AACCCACUCCAACCCAACCUGUUUAUGAUCCAGUAGUGUUGGGUCGGGUUUGCAAAAAAAAGUGCACAAACCCGACCCAACCCAUUAAAUUUUGGUUGGGUUGGAUUGGGUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553710.3
ncRNA:24   UUUGUCCAACCCAACCUCACCCAA   1
  =**=*||*||||||||||||||||
targets:810   GCUUUGGAUGGGUUGGAGUGGGUU   833

1.0 PREDICTED: Glycine max ammonium transporter 3 member 2-like (LOC100782944), mRNA ammonium transporter 3 member 2-like(LOC100782944) coding protein psRNATarget
XM_003555392.3
ncRNA:24   UUU-----GUCCAACCCAACCUCACCCAA   1
  =||-----|=|||*|||||||||||*|||
targets:1335   GAAUGCUUCGGGUCGGGUUGGAGUGUGUU   1363

2.5 PREDICTED: Glycine max lysM domain receptor-like kinase 3 (LOC100820374), mRNA lysM domain receptor-like kinase 3(LOC100820374) coding protein psRNATarget