ncRNA ID | novel_gma_miR4443 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:33950681-33950859 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045232 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCCAGAUUUAAACGUUGACUGU - 22 |
Stem-loop(if miRNA) |
--UC       A  C                     G      C  C    UG           G  U  A     AAAA     --    U     CAGAUUU AA GUUGACUGUCAUAAAGAAAUG UGACGA CA GUGU  CGUUCUGAUUG AC AU AAAAG    AUGUU  AGAG U     ||||||| || ||||||||||||||||||||| |||||| || ||||  ||||||||||| || || |||||    |||||  ||||     GUUUAAA UU CAACUGACAGUAUUUCUUUGC ACUGCU GU CACA  GUAAGACUAAC UG UA UUUUC    UGCAG  UCUC G UUAU       C  A                     A      A  A    GU           A  -  C     --CA     GU    G |
Stem-loop sequence | UCCAGAUUUAAACGUUGACUGUCAUAAAGAAAUGGUGACGACCACGUGUUGCGUUCUGAUUGGACUAUAAAAAGAAAAAUGUUAGAGUUGGCUCUUGGACGUACCUUUUCAUGUACAAUCAGAAUGUGACACAUGAUCGUCAACGUUUCUUUAUGACAGUCAACAUUCAAAUUUGUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583894.2 |
|
2.5 | PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA | probable WRKY transcription factor 3(LOC100802109) | coding protein | psRNATarget |