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BaseInfo

ncRNA ID novel_gma_miR4443
Species Glycine max
Class miRNA
Genome position Chr11:33950681-33950859 [+]
Reference genome Glycine_max_v2.0
Source SRR2045232
Length 22
Mature sequence(if miRNA) 1 - UCCAGAUUUAAACGUUGACUGU - 22
Stem-loop(if miRNA) --UC       A  C                     G      C  C    UG           G  U  A     AAAA     --    U
    CAGAUUU AA GUUGACUGUCAUAAAGAAAUG UGACGA CA GUGU  CGUUCUGAUUG AC AU AAAAG    AUGUU  AGAG U
    ||||||| || ||||||||||||||||||||| |||||| || ||||  ||||||||||| || || |||||    |||||  ||||
    GUUUAAA UU CAACUGACAGUAUUUCUUUGC ACUGCU GU CACA  GUAAGACUAAC UG UA UUUUC    UGCAG  UCUC G
UUAU       C  A                     A      A  A    GU           A  -  C     --CA     GU    G
Stem-loop sequence UCCAGAUUUAAACGUUGACUGUCAUAAAGAAAUGGUGACGACCACGUGUUGCGUUCUGAUUGGACUAUAAAAAGAAAAAUGUUAGAGUUGGCUCUUGGACGUACCUUUUCAUGUACAAUCAGAAUGUGACACAUGAUCGUCAACGUUUCUUUAUGACAGUCAACAUUCAAAUUUGUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583894.2
ncRNA:22   UGUCAGUUGCAAAUUUAGACCU   1
  ||||||||||||||||||*||*
targets:2569   ACAGUCAACGUUUAAAUCGGGC   2590

2.5 PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA probable WRKY transcription factor 3(LOC100802109) coding protein psRNATarget