Search result

BaseInfo

ncRNA ID	novel_gma_miR4438
Species	Glycine max
Class	miRNA
Genome position	Chr10:10049525-10049575 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294487
Length	22
Mature sequence(if miRNA)	30 - CCGGAAGAAGAAUUUGUGACUU - 51
Stem-loop(if miRNA)	--       A  AA      ---    C   CCGGAAG AG  UUUGUG   ACUU C   ||||||| ||  ||||||   ||||   GGCCUUC UC  AAACAC   UGAA G AA       A  --      CCA    G
Stem-loop sequence	CCGGAAGAAGAAUUUGUGACUUCCGGAAGUACCCACAAACUACUUCCGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006573284.2	ncRNA:22   UUCAGUGUUUAAGAAGAAGGCC   1   ***|||=*|||||||||||||| targets:1650   CCUUCAUCAAUUCUUCUUCCGG   1671 Target Full Sequence	2.0	PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA	aquaporin PIP1-2-like(LOC100781984)	coding protein	psRNATarget
BT098485.1	ncRNA:22   UUCAGUGUUUAAGAAGAAGGCC   1   ****||||||||||||||||*| targets:391   CCUGCACAAAUUCUUCUUCCAG   412 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-12D21 unknown mRNA	NA	coding protein	psRNATarget
XM_003549661.3	ncRNA:22   UUCAGUGUUUAAGAAGAAGGCC   1   ||||**|*|||||||||||||| targets:686   AAGUAUCUAAUUCUUCUUCCGG   707 Target Full Sequence	3.0	PREDICTED: Glycine max WRKY transcription factor 6-like (LOC100784668), mRNA	WRKY transcription factor 6-like(LOC100784668)	coding protein	psRNATarget