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BaseInfo

ncRNA ID novel_gma_miR4435
Species Glycine max
Class miRNA
Genome position Chr17:36361558-36361703 [-]
Reference genome Glycine_max_v2.0
Source SRR2045232;SRR1294476
Length 24
Mature sequence(if miRNA) 1 - CAAAACAAACAUUUUGCAAGGACU - 24
Stem-loop(if miRNA) --              G             -                     A      UUU  C  UUCAAA
  UCCUUGCAAAAUGU UGUUUUGUUUUUU GUUCUUAAAGUGUUUUAGAUA UGUUUU   CA UG      G
  |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||   || ||      U
  AGGAACGUUUUACA ACAAAACAAAAAA CAAGAAUUUCACAAAAUCUAU ACGAAA   GU AU      A
UC              A             A                     C      CUU  U  UUUUUU
Stem-loop sequence UCCUUGCAAAAUGUGUGUUUUGUUUUUUGUUCUUAAAGUGUUUUAGAUAAUGUUUUUUUCACUGUUCAAAGUAUUUUUUUAUUGUUCAAAGCACUAUCUAAAACACUUUAAGAACAAAAAAACAAAACAAACAUUUUGCAAGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551307.3
ncRNA:24   UCAGGAACGUUUUACAAACAAAAC   1
  **|==||*=|||||||||||||||
targets:36   UUUUUUUUUAAAAUGUUUGUUUUG   59

2.0 PREDICTED: Glycine max nuclear transcription factor Y subunit A-1-like (LOC100808378), transcript variant X1, mRNA nuclear transcription factor Y subunit A-1-like(LOC100808378) coding protein psRNATarget