ncRNA ID | novel_gma_miR4435 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:36361558-36361703 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045232;SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAAACAAACAUUUUGCAAGGACU - 24 |
Stem-loop(if miRNA) |
--              G             -                     A      UUU  C  UUCAAA   UCCUUGCAAAAUGU UGUUUUGUUUUUU GUUCUUAAAGUGUUUUAGAUA UGUUUU   CA UG      G   |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||   || ||      U   AGGAACGUUUUACA ACAAAACAAAAAA CAAGAAUUUCACAAAAUCUAU ACGAAA   GU AU      A UC              A             A                     C      CUU  U  UUUUUU |
Stem-loop sequence | UCCUUGCAAAAUGUGUGUUUUGUUUUUUGUUCUUAAAGUGUUUUAGAUAAUGUUUUUUUCACUGUUCAAAGUAUUUUUUUAUUGUUCAAAGCACUAUCUAAAACACUUUAAGAACAAAAAAACAAAACAAACAUUUUGCAAGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003551307.3 |
|
2.0 | PREDICTED: Glycine max nuclear transcription factor Y subunit A-1-like (LOC100808378), transcript variant X1, mRNA | nuclear transcription factor Y subunit A-1-like(LOC100808378) | coding protein | psRNATarget |