Search result

BaseInfo

ncRNA ID novel_gma_miR4434
Species Glycine max
Class miRNA
Genome position Chr17:30925725-30925829 [+]
Reference genome Glycine_max_v2.0
Source SRR2045232;SRR2045236
Length 24
Mature sequence(if miRNA) 82 - UCUUCCGGAAUUGAGCUUAGUAAC - 105
Stem-loop(if miRNA) --                              UA    CCAAUUC     GA
  UACUAAGCUCAAUUCCGGAAGAAGUGGUUC  GAAG       UGGAA  A
  ||||||||||||||||||||||||||||||  ||||       |||||  G
  AUGAUUCGAGUUAAGGCCUUCUUCAUCAAG  CUUC       ACCUU  U
CA                              GC    ACAAAAA     GU
Stem-loop sequence UACUAAGCUCAAUUCCGGAAGAAGUGGUUCUAGAAGCCAAUUCUGGAAGAAGUUGUUCCAAAAAACACUUCCGGAACUACUUCUUCCGGAAUUGAGCUUAGUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529258.3
ncRNA:24   CAAUGAUUCGAGUUAAGGCCUUCU   1
  ***=|*||||||||||||*|||||
targets:1342   UGGGCAAAGCUCAAUUCCAGAAGA   1365

2.5 PREDICTED: Glycine max mitochondrial inner membrane protein OXA1-like (LOC100817052), mRNA mitochondrial inner membrane protein OXA1-like(LOC100817052) coding protein psRNATarget