ncRNA ID | novel_gma_miR4427 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:6711109-6711238 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACAAACACAUUUUGAAAGGACU - 24 |
Stem-loop(if miRNA) |
--     A            A          CA  -C           U      ---------    UU   UCCUU CAAAAUGUGUUU UUUUGUUUUU  UC  UUAAAGUGCUU AGAUAA         CGCU  G   ||||| |||||||||||| ||||||||||  ||  ||||||||||| ||||||         ||||   AGGAA GUUUUACACAAA AAAAUAAAAA  AG  AAUUUCACGAA UCUAUU         GUGA  A UC     A            C          AC  AA           C      ACAAAAAAA    UA |
Stem-loop sequence | UCCUUACAAAAUGUGUUUAUUUUGUUUUUCAUCCUUAAAGUGCUUUAGAUAACGCUUUGAAUAGUGAAAAAAACAUUAUCUCAAGCACUUUAAAAGACAAAAAAUAAAACAAACACAUUUUGAAAGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774174.1 |
|
2.5 | PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 25-like (LOC100789451), transcript variant X8, mRNA | mediator of RNA polymerase II transcription subunit 25-like(LOC100789451) | coding protein | psRNATarget | |||||||||
XM_006597742.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102660146 (LOC102660146), mRNA | uncharacterized LOC102660146(LOC102660146) | coding protein | psRNATarget |