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BaseInfo

ncRNA ID novel_gma_miR4413
Species Glycine max
Class miRNA
Genome position Chr8:13378261-13378359 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231
Length 24
Mature sequence(if miRNA) 76 - UAUUAGGACAACCGAUGUAGAAAU - 99
Stem-loop(if miRNA) --                      -AUCCUA                UAA
  UAUUAGGACAACCGAUGUAGAA       CAUUCUAAGACGGGUU   A
  ||||||||||||||||||||||       ||||||||||||||||
  AUAAUCCUGUUGGCUACAUCUU       GUAAGAUUCUGCCCAA   G
CA                      CAUAUGG                CUA
Stem-loop sequence UAUUAGGACAACCGAUGUAGAAAUCCUACAUUCUAAGACGGGUUUAAAGAUCAACCCGUCUUAGAAUGGGUAUACUUCUACAUCGGUUGUCCUAAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   UAAAGAUGUAGCCAACAGGAUUAU   1
  ||||||||||=|||||||||||||
targets:2109   AUUUCUACAUUGGUUGUCCUAAUA   2132

1.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014767461.1
ncRNA:24   UAAAGAUGUAGCCAACAGGAUUAU   1
  |*|*|||||||||||*||||||||
targets:2251   AAUCCUACAUCGGUUAUCCUAAUA   2274

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014771283.1
ncRNA:24   UA--AAGAUGUAGCCAACAGGAUUAU   1
  ||--|||*||||||||||||*|||||
targets:1868   AUAAUUCAACAUCGGUUGUCAUAAUA   1893

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget
XM_014771284.1
ncRNA:24   UA--AAGAUGUAGCCAACAGGAUUAU   1
  ||--|||*||||||||||||*|||||
targets:1932   AUAAUUCAACAUCGGUUGUCAUAAUA   1957

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget