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BaseInfo

ncRNA ID novel_gma_miR4406
Species Glycine max
Class miRNA
Genome position Chr1:7942779-7942926 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231
Length 24
Mature sequence(if miRNA) 1 - AUUUGCAAGGACUAAAAACAAAAA - 24
Stem-loop(if miRNA) ----UU     C               A   -          UA  CUU     GCUUUAUAUAACACUUUUUUAA
      UUUUU GUCCUUGUAAAUUAU UUU UUUUGUUUUU  UC   GUGAU                      C
      ||||| ||||||||||||||| ||| ||||||||||  ||   |||||                      U
      AAAAA CAGGAACGUUUAAUA AAA AAAACAAAAA  AG   AAUUU                      G
AAAAAC     U               C   U          UC  --A     CGUGAAAUUUACUACGAAACUU
Stem-loop sequence UUUUUUUCGUCCUUGUAAAUUAUAUUUUUUUGUUUUUUAUCCUUGUGAUGCUUUAUAUAACACUUUUUUAACUGUUCAAAGCAUCAUUUAAAGUGCUUUAAAGACUAAAAACAAAAUAAACAUAAUUUGCAAGGACUAAAAACAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532761.2
ncRNA:24   AAAAACAAAAAUCAGGAACGUUUA   1
  ||*||*|||||||||||||*||||
targets:1561   UUCUUUUUUUUAGUCCUUGAAAAU   1584

2.5 PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA uncharacterized LOC100819385(LOC100819385) coding protein psRNATarget