ncRNA ID | novel_gma_miR4406 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:7942779-7942926 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUGCAAGGACUAAAAACAAAAA - 24 |
Stem-loop(if miRNA) |
----UU     C               A   -          UA  CUU     GCUUUAUAUAACACUUUUUUAA       UUUUU GUCCUUGUAAAUUAU UUU UUUUGUUUUU  UC   GUGAU                      C       ||||| ||||||||||||||| ||| ||||||||||  ||   |||||                      U       AAAAA CAGGAACGUUUAAUA AAA AAAACAAAAA  AG   AAUUU                      G AAAAAC     U               C   U          UC  --A     CGUGAAAUUUACUACGAAACUU |
Stem-loop sequence | UUUUUUUCGUCCUUGUAAAUUAUAUUUUUUUGUUUUUUAUCCUUGUGAUGCUUUAUAUAACACUUUUUUAACUGUUCAAAGCAUCAUUUAAAGUGCUUUAAAGACUAAAAACAAAAUAAACAUAAUUUGCAAGGACUAAAAACAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532761.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA | uncharacterized LOC100819385(LOC100819385) | coding protein | psRNATarget |