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BaseInfo

ncRNA ID novel_gma_miR4403
Species Glycine max
Class miRNA
Genome position Chr1:19038028-19038123 [-]
Reference genome Glycine_max_v2.0
Source SRR1294487
Length 24
Mature sequence(if miRNA) 73 - GAAGAAUGAAGAACGGUGAAGAAC - 96
Stem-loop(if miRNA) ----- A    U     ACG U         U  AAGAAUU  U   AG   C
     G AGAA GAAGA   G GAAGAACAA GU       GG CAC  UUG G
     | |||| |||||   | ||||||||| ||       || |||  ||| A
     C UCUU CUUCU   C CUUUUUGUU CA       CC GUG  GAC U
UUUUU C    U     --A -         C  ----GCU  -   AA   U
Stem-loop sequence GAAGAAUGAAGAACGGUGAAGAACAAUGUAAGAAUUGGUCACAGUUGCGAUUCAGAAGUGCCUCGACCUUGUUUUUCCAUCUUCUUUCUCCUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526860.3
ncRNA:24   CAAG-AAGUGGCAAGAAGUAAGAAG   1
  *|||-|||*|||||||||*||||||
targets:155   CUUCCUUCCCCGUUCUUCUUUCUUC   179

2.5 PREDICTED: Glycine max chaperone protein ClpD, chloroplastic (LOC100793074), mRNA chaperone protein ClpD, chloroplastic(LOC100793074) coding protein psRNATarget