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BaseInfo

ncRNA ID	novel_gma_miR4398
Species	Glycine max
Class	miRNA
Genome position	Chr6:37495453-37495548 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045231
Length	21
Mature sequence(if miRNA)	76 - AAUUGUUGGGGAGAUUCAAGG - 96
Stem-loop(if miRNA)	--         AG   ACUUU   AAUAAAAUUUAUUUUCAUUUUUAAUUG   UUGAAUUUU  CCC     UAG                           U   |||||||||  |||     |||                           A   AACUUAGAG  GGG     UUG                           U GG         --   -----   UUAAUGUUCAGGUUUUUAUUCAUAUUU
Stem-loop sequence	UUGAAUUUUAGCCCACUUUUAGAAUAAAAUUUAUUUUCAUUUUUAAUUGUAUUUUAUACUUAUUUUUGGACUUGUAAUUGUUGGGGAGAUUCAAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006599890.1	ncRNA:21   GGAACUUAGAGGGGUUGUUAA   1   |||*||||||||||||||||| targets:176   CCUCGAAUCUCCCCAACAAUU   196 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102663510 (LOC102663510), mRNA	uncharacterized LOC102663510(LOC102663510)	coding protein	psRNATarget
XM_014776461.1	ncRNA:21   GGAACUUAGAGGGGUUGUUAA   1   |||*||||||||||||||||| targets:2049   CCUCGAAUCUCCCCAACAAUU   2069 Target Full Sequence	1.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X2, mRNA	zinc finger CCCH domain-containing protein 38-like(LOC100803151)	coding protein	psRNATarget
XM_014776460.1	ncRNA:21   GGAACUUAGAGGGGUUGUUAA   1   |||*||||||||||||||||| targets:2049   CCUCGAAUCUCCCCAACAAUU   2069 Target Full Sequence	1.0	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X1, mRNA	zinc finger CCCH domain-containing protein 38-like(LOC100803151)	coding protein	psRNATarget
XM_014777225.1	ncRNA:21   GGAACUUAGAGGGGUUGUUAA   1   |||*|||*||||||||||||| targets:2411   CCUCGAACCUCCCCAACAAUU   2431 Target Full Sequence	2.0	PREDICTED: Glycine max J domain-containing protein required for chloroplast accumulation response 1-like (LOC100820241), transcript variant X2, mRNA	J domain-containing protein required for chloroplast accumulation response 1-like(LOC100820241)	coding protein	psRNATarget
XM_014777226.1	ncRNA:21   GGAACUUAGAGGGGUUGUUAA   1   |||*|||*||||||||||||| targets:2552   CCUCGAACCUCCCCAACAAUU   2572 Target Full Sequence	2.0	PREDICTED: Glycine max J domain-containing protein required for chloroplast accumulation response 1-like (LOC100820241), transcript variant X3, mRNA	J domain-containing protein required for chloroplast accumulation response 1-like(LOC100820241)	coding protein	psRNATarget