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BaseInfo

ncRNA ID	novel_gma_miR4393
Species	Glycine max
Class	miRNA
Genome position	Chr16:8399591-8399685 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294487
Length	22
Mature sequence(if miRNA)	1 - UUAGGACAACCGAUGUAGAAAU - 22
Stem-loop(if miRNA)	--                         CC                U G   UUAGGACAACCGAUGUAGAAAUCUG  CAUUUUAAGACGGGUU G A   |||||||||||||||||||||||||  |||||||||||||||| |   AGUCCUGUUGGCUACAUCUUUAGAC  GUAAGAUUCUGCCCAA C G AA                         -C                C C
Stem-loop sequence	UUAGGACAACCGAUGUAGAAAUCUGCCCAUUUUAAGACGGGUUUGGAGCCCAACCCGUCUUAGAAUGCCAGAUUUCUACAUCGGUUGUCCUGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767461.1	ncRNA:22   UAAAGAUGUAGCCAACAGGAUU   1   ||||||||||=||||||||||| targets:2109   AUUUCUACAUUGGUUGUCCUAA   2130 Target Full Sequence	1.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014767461.1	ncRNA:22   UAAAGAUGUAGCCAACAGGAUU   1   |*|*|||||||||||*|||||| targets:2251   AAUCCUACAUCGGUUAUCCUAA   2272 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_014771283.1	ncRNA:22   UA--AAGAUGUAGCCAACAGGAUU   1   ||--|||*||||||||||||*||| targets:1868   AUAAUUCAACAUCGGUUGUCAUAA   1891 Target Full Sequence	2.5	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget
XM_014771284.1	ncRNA:22   UA--AAGAUGUAGCCAACAGGAUU   1   ||--|||*||||||||||||*||| targets:1932   AUAAUUCAACAUCGGUUGUCAUAA   1955 Target Full Sequence	2.5	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA	protein NRT1/ PTR FAMILY 7.3-like(LOC100803433)	coding protein	psRNATarget