ncRNA ID | novel_gma_miR4392 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:27087952-27088173 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR2045239;SRR1295517;SRR1295523;SRR1294476 |
Length | 26 |
Mature sequence(if miRNA) | 197 - AUGACAAAACUUGAACUGGAGGCACC - 222 |
Stem-loop(if miRNA) |
--C             A                   A            U       A  A     U                 -UA  CU  UAUACAUUAACUAAAAUUU    GCCUCCAGUUCAA UUUUGUCAUUUAGCAGGAG CACCACCCCACC GGCUCCU CU UUCAA UUUUUAUUUUUUUAUUU   GA  UG                   U    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||||   ||  ||                   C    CGGAGGUCAAGUU AAAACAGUAAAUCGUCCUC GUGGUGGGGUGG CCGAGGA GA AAGUU AAAAGUAAAAAAAUAAA   CU  UU                   U CCA             C                   C            U       G  C     U                 UAA  --  UUAAUCUAUAUUUAUAAUA |
Stem-loop sequence | CGCCUCCAGUUCAAAUUUUGUCAUUUAGCAGGAGACACCACCCCACCUGGCUCCUACUAUUCAAUUUUUUAUUUUUUUAUUUUAGACUUGUAUACAUUAACUAAAAUUUUCUAUAAUAUUUAUAUCUAAUUUUUCAAUAAAUAAAAAAAUGAAAAUUUGAACAGGAGGAGCCUGGUGGGGUGGUGCCUCCUGCUAAAUGACAAAACUUGAACUGGAGGCACC |