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BaseInfo

ncRNA ID	novel_gma_miR4388
Species	Glycine max
Class	miRNA
Genome position	Chr4:19724636-19724777 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045231;SRR2045237
Length	21
Mature sequence(if miRNA)	122 - CAAUCCGUGCCUCUUCCUCCU - 142
Stem-loop(if miRNA)	--     CG   C        C                     G     C    ---G -        --  UA   CAAUC  UGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU    C UUUUGUAA  AC  C   |||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||    | ||||||||  ||   GUUAG  ACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA    G AAAACAUU  UG  A UG     AU   A        C                     G     U    GCAA C        AA  UC
Stem-loop sequence	CAAUCCGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUGUAAUUACAAAACGAACGAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCAUAGAUUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779469.1	ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1   |||||||||||*||||||||| targets:815   AGGAGGAAGAGCCACGGAUUG   835 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006586135.2	ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1   |||||||||||*||||||||| targets:815   AGGAGGAAGAGCCACGGAUUG   835 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1   |||||||||||*||||||||| targets:71   AGGAGGAAGAGCCACGGAUUG   91 Target Full Sequence	1.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget