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BaseInfo

ncRNA ID novel_gma_miR4378
Species Glycine max
Class miRNA
Genome position Chr2:38724555-38724601 [+]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR1295523
Length 19
Mature sequence(if miRNA) 1 - GUGGUAUGAUUCUCGCUUG - 19
Stem-loop(if miRNA) --        -A       UUGAU
  GUGGUAUG  UUCUCGC     A
  ||||||||  |||||||
  UAUCGUAU  AAGGGUG     A
UU        GA       UGAGU
Stem-loop sequence GUGGUAUGAUUCUCGCUUGAUAAUGAGUGUGGGAAAGUAUGCUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770260.1
ncRNA:19   GUUCGCUCUUAGUAUGGUG   1
  =||||||||||||||||||
targets:199   UAAGCGAGAAUCAUACCAC   217

1.0 PREDICTED: Glycine max small heat shock protein, chloroplastic-like (LOC100798298), transcript variant X4, mRNA small heat shock protein, chloroplastic-like(LOC100798298) coding protein psRNATarget
XM_014777325.1
ncRNA:19   GUUCGCUCUUAGUAUGGUG   1
  *||||||||||||||||||
targets:2935   AAAGCGAGAAUCAUACCAC   2953

1.0 PREDICTED: Glycine max uncharacterized LOC100526875 (LOC100526875), transcript variant X1, mRNA uncharacterized LOC100526875(LOC100526875) coding protein psRNATarget