ncRNA ID | novel_gma_miR4378 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:38724555-38724601 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR1295523 |
Length | 19 |
Mature sequence(if miRNA) | 1 - GUGGUAUGAUUCUCGCUUG - 19 |
Stem-loop(if miRNA) |
--        -A       UUGAU   GUGGUAUG  UUCUCGC     A   ||||||||  |||||||   UAUCGUAU  AAGGGUG     A UU        GA       UGAGU |
Stem-loop sequence | GUGGUAUGAUUCUCGCUUGAUAAUGAGUGUGGGAAAGUAUGCUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014770260.1 |
|
1.0 | PREDICTED: Glycine max small heat shock protein, chloroplastic-like (LOC100798298), transcript variant X4, mRNA | small heat shock protein, chloroplastic-like(LOC100798298) | coding protein | psRNATarget | |||||||||
XM_014777325.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100526875 (LOC100526875), transcript variant X1, mRNA | uncharacterized LOC100526875(LOC100526875) | coding protein | psRNATarget |