ncRNA ID | novel_gma_miR4371 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:44605351-44605539 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGGGGACAAAAAAUGAACUUGACC - 24 |
Stem-loop(if miRNA) |
--C       -GC     GA          -U       A      ---AU   - U             AC   G        G AACCAGGG    A    CAAGUUU   UUUUG  CCCCCAAAUU  AGAAGUG UUUUUU     UCC C UAAUUUGAAAAUA  CCA UUUUAGUC U        ACAA A    |||||||   |||||  ||||||||||  ||||||| ||||||     ||| | |||||||||||||  ||| |||||||| |        |||| U    GUUCAAG   AAAAC  GGGGGUUUAA  UUUUCAC AAAAAA     AGG G AUUAAACUUUUAU  GGU GAAAUUAG A        UGUU A CCA       UAA     -A          UU       C      AAAAC   A U             CA   -        G --AUUAAA    A |
Stem-loop sequence | CCAAGUUUGCUUUUGGACCCCCAAAUUUAGAAGUGAUUUUUUAUUCCCUUAAUUUGAAAAUAACCCAGUUUUAGUCGUAACCAGGGACAAAAUAAUUGUAAAUUAAGGAUUAAAGUGGACUAUUUUCAAAUUAUGAGGACAAAAAAAAAACCACUUUUUUAAUUUGGGGGACAAAAAAUGAACUUGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576716.2 |
|
2.5 | PREDICTED: Glycine max calmodulin-like protein 3 (LOC100798114), mRNA | calmodulin-like protein 3(LOC100798114) | coding protein | psRNATarget |