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BaseInfo

ncRNA ID novel_gma_miR4371
Species Glycine max
Class miRNA
Genome position Chr19:44605351-44605539 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231
Length 24
Mature sequence(if miRNA) 1 - GGGGGACAAAAAAUGAACUUGACC - 24
Stem-loop(if miRNA) --C       -GC     GA          -U       A      ---AU   - U             AC   G        G AACCAGGG    A
   CAAGUUU   UUUUG  CCCCCAAAUU  AGAAGUG UUUUUU     UCC C UAAUUUGAAAAUA  CCA UUUUAGUC U        ACAA A
   |||||||   |||||  ||||||||||  ||||||| ||||||     ||| | |||||||||||||  ||| |||||||| |        |||| U
   GUUCAAG   AAAAC  GGGGGUUUAA  UUUUCAC AAAAAA     AGG G AUUAAACUUUUAU  GGU GAAAUUAG A        UGUU A
CCA       UAA     -A          UU       C      AAAAC   A U             CA   -        G --AUUAAA    A
Stem-loop sequence CCAAGUUUGCUUUUGGACCCCCAAAUUUAGAAGUGAUUUUUUAUUCCCUUAAUUUGAAAAUAACCCAGUUUUAGUCGUAACCAGGGACAAAAUAAUUGUAAAUUAAGGAUUAAAGUGGACUAUUUUCAAAUUAUGAGGACAAAAAAAAAACCACUUUUUUAAUUUGGGGGACAAAAAAUGAACUUGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576716.2
ncRNA:24   CC-AGUUCAAGUAAAAAACAGGGGG   1
  ||-|*||||||*||||||*||||||
targets:19   GGCUAAAGUUCCUUUUUUUUCCCCC   43

2.5 PREDICTED: Glycine max calmodulin-like protein 3 (LOC100798114), mRNA calmodulin-like protein 3(LOC100798114) coding protein psRNATarget