ncRNA ID | novel_gma_miR4364 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:1788093-1788191 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR1295523 |
Length | 24 |
Mature sequence(if miRNA) | 76 - UUUCCUUAUGUGGUGGCUCGUGGU - 99 |
Stem-loop(if miRNA) |
--GUU    -          C    -AGAAA   -   --A    UG  -  U      GAGC ACCAUAUAAG GAAG      ACC CAU   AACC  AG CC U      |||| |||||||||| ||||      ||| |||   ||||  || ||      CUCG UGGUGUAUUC CUUU      UGG GUG   UUGG  UU GG A UGGUG    G          -    GAACUG   U   AGA    GU  U  A |
Stem-loop sequence | GUUGAGCACCAUAUAAGCGAAGAGAAAACCCAUAAACCUGAGCCUUAAGGUUUUGGGUUAGAGUGUGGUGUCAAGUUUCCUUAUGUGGUGGCUCGUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775459.1 |
|
0.0 | PREDICTED: Glycine max conserved oligomeric Golgi complex subunit 6 (LOC100776278), mRNA | conserved oligomeric Golgi complex subunit 6(LOC100776278) | coding protein | psRNATarget | |||||||||
XM_014776460.1 |
|
1.0 | PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X1, mRNA | zinc finger CCCH domain-containing protein 38-like(LOC100803151) | coding protein | psRNATarget | |||||||||
XM_014776461.1 |
|
1.0 | PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X2, mRNA | zinc finger CCCH domain-containing protein 38-like(LOC100803151) | coding protein | psRNATarget |