Search result

BaseInfo

ncRNA ID novel_gma_miR4364
Species Glycine max
Class miRNA
Genome position Chr19:1788093-1788191 [+]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR1295523
Length 24
Mature sequence(if miRNA) 76 - UUUCCUUAUGUGGUGGCUCGUGGU - 99
Stem-loop(if miRNA) --GUU    -          C    -AGAAA   -   --A    UG  -  U
     GAGC ACCAUAUAAG GAAG      ACC CAU   AACC  AG CC U
     |||| |||||||||| ||||      ||| |||   ||||  || ||
     CUCG UGGUGUAUUC CUUU      UGG GUG   UUGG  UU GG A
UGGUG    G          -    GAACUG   U   AGA    GU  U  A
Stem-loop sequence GUUGAGCACCAUAUAAGCGAAGAGAAAACCCAUAAACCUGAGCCUUAAGGUUUUGGGUUAGAGUGUGGUGUCAAGUUUCCUUAUGUGGUGGCUCGUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775459.1
ncRNA:24   UGGUGCUCGGUGGUGUAUUCCUUU   1
  |=||||||||||||||||||||||
targets:5983   AUCACGAGCCACCACAUAAGGAAA   6006

0.0 PREDICTED: Glycine max conserved oligomeric Golgi complex subunit 6 (LOC100776278), mRNA conserved oligomeric Golgi complex subunit 6(LOC100776278) coding protein psRNATarget
XM_014776460.1
ncRNA:24   UGGUGCUCGGUGGUGUAUUCCUUU   1
  |||||||||||||||||||||||=
targets:1460   ACCACGAGCCACCACAUAAGGAAG   1483

1.0 PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X1, mRNA zinc finger CCCH domain-containing protein 38-like(LOC100803151) coding protein psRNATarget
XM_014776461.1
ncRNA:24   UGGUGCUCGGUGGUGUAUUCCUUU   1
  |||||||||||||||||||||||=
targets:1460   ACCACGAGCCACCACAUAAGGAAG   1483

1.0 PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X2, mRNA zinc finger CCCH domain-containing protein 38-like(LOC100803151) coding protein psRNATarget