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BaseInfo

ncRNA ID novel_gma_miR4359
Species Glycine max
Class miRNA
Genome position Chr18:51798516-51798582 [+]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR2045232;SRR2045236;SRR1295522
Length 24
Mature sequence(if miRNA) 44 - UUCAAGCCAUUGCAUACCACCAUU - 67
Stem-loop(if miRNA) --UA       C     A A      AAAAUUA
    GUGGUAU CAAUG C UGAAAG       U
    ||||||| ||||| | ||||||       U
    CACCAUA GUUAC G ACUUUC       A
UUAC       C     C A      CUUACAU
Stem-loop sequence UAGUGGUAUCCAAUGACAUGAAAGAAAAUUAUUAUACAUUCCUUUCAAGCCAUUGCAUACCACCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577091.2
ncRNA:24   UUA-----CCACCAUACGUUACCGAACUU   1
  |||-----||||||||||||||||*||||
targets:1682   AAUCUAGGGGUGGUAUGCAAUGGCAUGAA   1710

1.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX3-like (LOC100785063), transcript variant X2, mRNA histone-lysine N-methyltransferase ATX3-like(LOC100785063) coding protein psRNATarget
XM_006577090.2
ncRNA:24   UUA-----CCACCAUACGUUACCGAACUU   1
  |||-----||||||||||||||||*||||
targets:1680   AAUCUAGGGGUGGUAUGCAAUGGCAUGAA   1708

1.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX3-like (LOC100785063), transcript variant X1, mRNA histone-lysine N-methyltransferase ATX3-like(LOC100785063) coding protein psRNATarget
XM_006604660.2
ncRNA:24   UUACCACCAUACGUUACCGAACUU   1
  |=||||**||||||||||||||||
targets:1637   AGUGGUCUUAUGCAAUGGCUUGAA   1660

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX3-like (LOC100811960), mRNA histone-lysine N-methyltransferase ATX3-like(LOC100811960) coding protein psRNATarget