ncRNA ID | novel_gma_miR4357 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:36629332-36629470 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR2045237 |
Length | 21 |
Mature sequence(if miRNA) | 119 - CAAUCCGUGCCUCUUCCUCCU - 139 |
Stem-loop(if miRNA) |
--     CG   C        C                     G     C    GU         C      CAAUC  UGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU  UUUUGUAAA UACA   |||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||  ||||||||| |||C   GUUAG  ACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA  AAAACAUUU AUGU UG     AU   A        C                     G     U    AC         A    |
Stem-loop sequence | CAAUCCGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGUUUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCAUAGAUUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779469.1 |
|
1.5 | PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA | SNF2 domain-containing protein CLASSY 3-like(LOC100806733) | coding protein | psRNATarget | |||||||||
XM_006586135.2 |
|
1.5 | PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA | SNF2 domain-containing protein CLASSY 3-like(LOC100806733) | coding protein | psRNATarget | |||||||||
XM_006591670.1 |
|
1.5 | PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA | glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828) | coding protein | psRNATarget |