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BaseInfo

ncRNA ID novel_gma_miR4357
Species Glycine max
Class miRNA
Genome position Chr10:36629332-36629470 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR2045237
Length 21
Mature sequence(if miRNA) 119 - CAAUCCGUGCCUCUUCCUCCU - 139
Stem-loop(if miRNA) --     CG   C        C                     G     C    GU         C   
  CAAUC  UGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU  UUUUGUAAA UACA
  |||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||  ||||||||| |||C
  GUUAG  ACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA  AAAACAUUU AUGU
UG     AU   A        C                     G     U    AC         A   
Stem-loop sequence CAAUCCGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGUUUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCAUAGAUUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779469.1
ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1
  |||||||||||*|||||||||
targets:815   AGGAGGAAGAGCCACGGAUUG   835

1.5 PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA SNF2 domain-containing protein CLASSY 3-like(LOC100806733) coding protein psRNATarget
XM_006586135.2
ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1
  |||||||||||*|||||||||
targets:815   AGGAGGAAGAGCCACGGAUUG   835

1.5 PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA SNF2 domain-containing protein CLASSY 3-like(LOC100806733) coding protein psRNATarget
XM_006591670.1
ncRNA:21   UCCUCCUUCUCCGUGCCUAAC   1
  |||||||||||*|||||||||
targets:71   AGGAGGAAGAGCCACGGAUUG   91

1.5 PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828) coding protein psRNATarget