ncRNA ID | novel_gma_miR4352 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:53541344-53541491 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUGCAAGGACUAAAAACAAAAA - 24 |
Stem-loop(if miRNA) |
--               C             GUU        A       GAGCA     G    G     AAAC   UUUGUUUUUGGUCCU GCAAAUUAUGUUU   UUGUUUUU GUCCUUA     CUUUA GUAG GCUUU    A   ||||||||||||||| |||||||||||||   |||||||| |||||||     ||||| |||| |||||    G   AAACAAAAAUCAGGA CGUUUAAUACAAA   AACAAAAA CAGGAAU     GAAAU UAUU UGAAA    U AA               A             ---        A       AUUAC     A    G     AAGG |
Stem-loop sequence | UUUGUUUUUGGUCCUCGCAAAUUAUGUUUGUUUUGUUUUUAGUCCUUAGAGCACUUUAGGUAGGGCUUUAAACAGUGGAAAAAGUGUUAUAUAAAGCAUUAUAAGGACAAAAAACAAAAACAUAAUUUGCAAGGACUAAAAACAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532761.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA | uncharacterized LOC100819385(LOC100819385) | coding protein | psRNATarget |