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BaseInfo

ncRNA ID novel_gma_miR4352
Species Glycine max
Class miRNA
Genome position Chr18:53541344-53541491 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231
Length 24
Mature sequence(if miRNA) 1 - AUUUGCAAGGACUAAAAACAAAAA - 24
Stem-loop(if miRNA) --               C             GUU        A       GAGCA     G    G     AAAC
  UUUGUUUUUGGUCCU GCAAAUUAUGUUU   UUGUUUUU GUCCUUA     CUUUA GUAG GCUUU    A
  ||||||||||||||| |||||||||||||   |||||||| |||||||     ||||| |||| |||||    G
  AAACAAAAAUCAGGA CGUUUAAUACAAA   AACAAAAA CAGGAAU     GAAAU UAUU UGAAA    U
AA               A             ---        A       AUUAC     A    G     AAGG
Stem-loop sequence UUUGUUUUUGGUCCUCGCAAAUUAUGUUUGUUUUGUUUUUAGUCCUUAGAGCACUUUAGGUAGGGCUUUAAACAGUGGAAAAAGUGUUAUAUAAAGCAUUAUAAGGACAAAAAACAAAAACAUAAUUUGCAAGGACUAAAAACAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532761.2
ncRNA:24   AAAAACAAAAAUCAGGAACGUUUA   1
  ||*||*|||||||||||||*||||
targets:1561   UUCUUUUUUUUAGUCCUUGAAAAU   1584

2.5 PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA uncharacterized LOC100819385(LOC100819385) coding protein psRNATarget