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BaseInfo

ncRNA ID	novel_gma_miR4342
Species	Glycine max
Class	miRNA
Genome position	Chr10:28206541-28206588 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045231
Length	24
Mature sequence(if miRNA)	1 - GAAGAGUCGGUCCCAUUAUUGUGC - 24
Stem-loop(if miRNA)	--   G   C  UC         U   GAA AGU GG  CCAUUAUUG G   ||| ||| ||  ||||||||| C   CUU UUA UC  GGUAAUGAC G AA   G   -  GA         A
Stem-loop sequence	GAAGAGUCGGUCCCAUUAUUGUGCGACAGUAAUGGAGCUAUUGUUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006581820.2	ncRNA:24   CGUGUUAUUACCCUGGCUGAGAAG   1   *||==*||||||||||||*||||| targets:1819   UCAUGUUAAUGGGACCGAGUCUUC   1842 Target Full Sequence	2.5	PREDICTED: Glycine max protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 (LOC100783002), transcript variant X2, mRNA	protein PLASTID TRANSCRIPTIONALLY ACTIVE 10(LOC100783002)	coding protein	psRNATarget
XM_003523086.3	ncRNA:24   CGUGUUAUUACCCUGGCUGAGAAG   1   *||==*||||||||||||*||||| targets:2052   UCAUGUUAAUGGGACCGAGUCUUC   2075 Target Full Sequence	2.5	PREDICTED: Glycine max protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like (LOC100775818), mRNA	protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like(LOC100775818)	coding protein	psRNATarget
XM_003526925.3	ncRNA:24   CGUGUUAUUACCCUGGCUGAGAAG   1   *||==*||||||||||||*||||| targets:2045   UCAUGUUAAUGGGACCGAGUCUUC   2068 Target Full Sequence	2.5	PREDICTED: Glycine max protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 (LOC100783002), transcript variant X1, mRNA	protein PLASTID TRANSCRIPTIONALLY ACTIVE 10(LOC100783002)	coding protein	psRNATarget