ncRNA ID | novel_gma_miR4338 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:17875839-17876062 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR1294478 |
Length | 24 |
Mature sequence(if miRNA) | 201 - AACGACAGGUAGUAAAUUGAAACA - 224 |
Stem-loop(if miRNA) |
--           CG    CA   -       A     C      U      U  U  A         A    CAUGCAC    U      AG  CU         CA    CGC   UUUUAAUUUAU  UCUG  CGU AGUCUUC UCCAA AAGUGA GACGUG CA AU GAGUGUCAC UCAU       GUCU AUCACU  CA  UCAUUGUCA  UCAU   U   |||||||||||  ||||  ||| ||||||| ||||| |||||| |||||| || || ||||||||| ||||       |||| ||||||  ||  |||||||||  ||||   AAAGUUAAAUG  GGAC  GCA UCAGGGG AGGUU UUUACU CUGUAC GU UA CUCACAGUG AGUA       CAGA UAGUGA  GU  AGUAACAGU  GGUA   U AC           AU    -A   A       A     A      U      U  U  C         C    ----AUU    U      CU  AC         AC    ACU |
Stem-loop sequence | UUUUAAUUUAUCGUCUGCACGUAGUCUUCAUCCAACAAGUGAUGACGUGUCAUAUAGAGUGUCACAUCAUCAUGCACGUCUUAUCACUAGCACUUCAUUGUCACAUCAUCGCUUUCAAUGGCAUGACAAUGACAUGUCAGUGAUUAGACUUAAUGACGUGACACUCCAUUUGUCAUGUCUUCAUUUAUUGGAAGGGGACUAACGACAGGUAGUAAAUUGAAACA |