Search result

BaseInfo

ncRNA ID novel_gma_miR4335
Species Glycine max
Class miRNA
Genome position Chr15:12478739-12478887 [+]
Reference genome Glycine_max_v2.0
Source SRR2045231
Length 24
Mature sequence(if miRNA) 126 - AUUUGCAAGGACUAAAAACAAAAA - 149
Stem-loop(if miRNA) --UUCAC    C                  U          -AGA     AAGAAC       A       GAAU
       UUUU GUCCUUGCAAAUUAUGUU GUUUUGUUUU    CCUUA      UUUAGAU GUGCUUU    A
       |||| |||||||||||||||||| ||||||||||    |||||      ||||||| |||||||    G
       AAAA CAGGAACGUUUAAUACAA UAAAACAAAA    GGAAU      AAAUCUA UAUGAAA    U
AAAAACA    U                  -          AACA     AAUACA       C       AAAG
Stem-loop sequence UUCACUUUUCGUCCUUGCAAAUUAUGUUUGUUUUGUUUUAGACCUUAAAGAACUUUAGAUAGUGCUUUGAAUAGUGAAAAAAGUAUCAUCUAAAACAUAAUAAGGACAAAAAACAAAAUAACAUAAUUUGCAAGGACUAAAAACAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532761.2
ncRNA:24   AAAAACAAAAAUCAGGAACGUUUA   1
  ||*||*|||||||||||||*||||
targets:1561   UUCUUUUUUUUAGUCCUUGAAAAU   1584

2.5 PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA uncharacterized LOC100819385(LOC100819385) coding protein psRNATarget