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BaseInfo

ncRNA ID novel_gma_miR4319
Species Glycine max
Class miRNA
Genome position Chr14:1691239-1691309 [+]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR2045232;SRR1294478
Length 24
Mature sequence(if miRNA) 48 - AAGUUUUGAAGGAGAAAAGGAAUG - 71
Stem-loop(if miRNA) --                  U      CAG     
  UUCCUUUUCUUUUUCAAA CUUUCU   UUAUGU
  |||||||||||||||||| ||||||   |||||A
  AAGGAAAAGAGGAAGUUU GAAAGA   AAUAUU
GU                  U      UAA     
Stem-loop sequence UUCCUUUUCUUUUUCAAAUCUUUCUCAGUUAUGUAUUAUAAAAUAGAAAGUUUUGAAGGAGAAAAGGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585750.2
ncRNA:24   GU---AAGGAAAAGAGGAAGUUUUGAA   1
  ||---|||||||||||||||||||||*
targets:709   CAGUCUUCCUUUUCUCCUUCAAAACUG   735

1.0 PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102667753), transcript variant X8, mRNA F-box/kelch-repeat protein At3g23880-like(LOC102667753) coding protein psRNATarget
XM_006585749.2
ncRNA:24   GU---AAGGAAAAGAGGAAGUUUUGAA   1
  ||---|||||||||||||||||||||*
targets:709   CAGUCUUCCUUUUCUCCUUCAAAACUG   735

1.0 PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102667753), transcript variant X7, mRNA F-box/kelch-repeat protein At3g23880-like(LOC102667753) coding protein psRNATarget
XM_006585748.2
ncRNA:24   GU---AAGGAAAAGAGGAAGUUUUGAA   1
  ||---|||||||||||||||||||||*
targets:709   CAGUCUUCCUUUUCUCCUUCAAAACUG   735

1.0 PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102667753), transcript variant X6, mRNA F-box/kelch-repeat protein At3g23880-like(LOC102667753) coding protein psRNATarget
XM_006585747.2
ncRNA:24   GU---AAGGAAAAGAGGAAGUUUUGAA   1
  ||---|||||||||||||||||||||*
targets:709   CAGUCUUCCUUUUCUCCUUCAAAACUG   735

1.0 PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102667753), transcript variant X5, mRNA F-box/kelch-repeat protein At3g23880-like(LOC102667753) coding protein psRNATarget