ncRNA ID | novel_gma_miR4316 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:37525740-37525879 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045231;SRR1294478 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAAUUGUAGAAGAUCCAGGACC - 24 |
Stem-loop(if miRNA) |
--    U           UG          GU      A  C     UUAU   G   -      UGC  GA   UUCU GAUCUUCUAUA  UUUUGUAAUU  AUUCCU GA UUAGU    GGU GCU UGAAAU   UA  A   |||| |||||||||||  ||||||||||  |||||| || |||||    ||| ||| ||||||   ||   AGGA CUAGAAGAUGU  AAAACAUUAA  UAAGGA CU AGUCA    UCG UGA GUUUUA   AU  A CC    C           UA          AC      C  C     --UU   G   C      -UA  AA |
Stem-loop sequence | UUCUUGAUCUUCUAUAUGUUUUGUAAUUGUAUUCCUAGACUUAGUUUAUGGUGGCUUGAAAUUGCUAGAAAAAUAAUAUUUUGCAGUGGCUUUACUGACUCCAGGAAUCAAAUUACAAAAAUUGUAGAAGAUCCAGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006575007.2 |
|
2.5 | PREDICTED: Glycine max transcription repressor OFP16-like (LOC102660213), mRNA | transcription repressor OFP16-like(LOC102660213) | coding protein | psRNATarget | |||||||||
XM_006588569.2 |
|
2.5 | PREDICTED: Glycine max transcription repressor OFP16-like (LOC102663296), mRNA | transcription repressor OFP16-like(LOC102663296) | coding protein | psRNATarget |