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BaseInfo

ncRNA ID novel_gma_miR4316
Species Glycine max
Class miRNA
Genome position Chr13:37525740-37525879 [-]
Reference genome Glycine_max_v2.0
Source SRR2045231;SRR1294478
Length 24
Mature sequence(if miRNA) 1 - AAAAAUUGUAGAAGAUCCAGGACC - 24
Stem-loop(if miRNA) --    U           UG          GU      A  C     UUAU   G   -      UGC  GA
  UUCU GAUCUUCUAUA  UUUUGUAAUU  AUUCCU GA UUAGU    GGU GCU UGAAAU   UA  A
  |||| |||||||||||  ||||||||||  |||||| || |||||    ||| ||| ||||||   ||
  AGGA CUAGAAGAUGU  AAAACAUUAA  UAAGGA CU AGUCA    UCG UGA GUUUUA   AU  A
CC    C           UA          AC      C  C     --UU   G   C      -UA  AA
Stem-loop sequence UUCUUGAUCUUCUAUAUGUUUUGUAAUUGUAUUCCUAGACUUAGUUUAUGGUGGCUUGAAAUUGCUAGAAAAAUAAUAUUUUGCAGUGGCUUUACUGACUCCAGGAAUCAAAUUACAAAAAUUGUAGAAGAUCCAGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006575007.2
ncRNA:24   CCAGGACCUAGAAGAUGUUAAAAA   1
  *||*=||||||||||*|||||||*
targets:725   AGUGUUGGAUCUUCUUCAAUUUUG   748

2.5 PREDICTED: Glycine max transcription repressor OFP16-like (LOC102660213), mRNA transcription repressor OFP16-like(LOC102660213) coding protein psRNATarget
XM_006588569.2
ncRNA:24   CCAGGACCUAGAAGAUGUUAAAAA   1
  *||*=||||||||||*|||||||*
targets:880   AGUGUUGGAUCUUCUUCAAUUUUG   903

2.5 PREDICTED: Glycine max transcription repressor OFP16-like (LOC102663296), mRNA transcription repressor OFP16-like(LOC102663296) coding protein psRNATarget