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BaseInfo

ncRNA ID	novel_gma_miR4313
Species	Glycine max
Class	miRNA
Genome position	Chr13:12626770-12626968 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045231;SRR1295522;SRR1295530
Length	24
Mature sequence(if miRNA)	176 - ACAGAAAUGAAAAGUUUAGGGACU - 199
Stem-loop(if miRNA)	--        AC     C               C   A        C      GAC         C        A     A       U      U   U   UCCCUGAA  UUUUA UUCUGUUUUUAGUCC UUA CUUUUUUU CGUCUU   UUUUAGUCC UUAACUUU UUUUC UCCUUAC UUUAGU CCU A   ||||||||  ||||| ||||||||||||||| ||| |||||||| ||||||   ||||||||| |||||||| ||||| ||||||| |||||| |||   AGGGAUUU  AAAGU AAGACAAAAAUCAGG AAU GAAAAAAA GUAGGA   AAAAUCAGG AAUUGAAA AAAAG AGGAAUG AAAUUA GGA A UC        GA     A               U   A        A      AUA         A        A     C       U      -   A
Stem-loop sequence	UCCCUGAAACUUUUACUUCUGUUUUUAGUCCCUUAACUUUUUUUCCGUCUUGACUUUUAGUCCCUUAACUUUAUUUUCAUCCUUACUUUUAGUUCCUUAAAAGGAUUAAAUGUAAGGACGAAAAAAAAGUUAAAGGACUAAAAAUAAGGAUGAAAAAAAAGAUAAUGGACUAAAAACAGAAAUGAAAAGUUUAGGGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014778934.1	ncRNA:24   UCA-GGGAUUUGAAAAGUAAAGACA   1   |||-===|*|=|||||||||||||| targets:808   AGUGUUUUCAGCUUUUCAUUUCUGU   832 Target Full Sequence	3.0	PREDICTED: Glycine max magnesium-transporting ATPase, P-type 1-like (LOC100778221), transcript variant X5, mRNA	magnesium-transporting ATPase, P-type 1-like(LOC100778221)	coding protein	psRNATarget
XM_014778933.1	ncRNA:24   UCA-GGGAUUUGAAAAGUAAAGACA   1   |||-===|*|=|||||||||||||| targets:808   AGUGUUUUCAGCUUUUCAUUUCUGU   832 Target Full Sequence	3.0	PREDICTED: Glycine max magnesium-transporting ATPase, P-type 1-like (LOC100778221), transcript variant X4, mRNA	magnesium-transporting ATPase, P-type 1-like(LOC100778221)	coding protein	psRNATarget
XM_014778932.1	ncRNA:24   UCA-GGGAUUUGAAAAGUAAAGACA   1   |||-===|*|=|||||||||||||| targets:809   AGUGUUUUCAGCUUUUCAUUUCUGU   833 Target Full Sequence	3.0	PREDICTED: Glycine max magnesium-transporting ATPase, P-type 1-like (LOC100778221), transcript variant X3, mRNA	magnesium-transporting ATPase, P-type 1-like(LOC100778221)	coding protein	psRNATarget
XM_014778931.1	ncRNA:24   UCA-GGGAUUUGAAAAGUAAAGACA   1   |||-===|*|=|||||||||||||| targets:808   AGUGUUUUCAGCUUUUCAUUUCUGU   832 Target Full Sequence	3.0	PREDICTED: Glycine max magnesium-transporting ATPase, P-type 1-like (LOC100778221), transcript variant X2, mRNA	magnesium-transporting ATPase, P-type 1-like(LOC100778221)	coding protein	psRNATarget
XM_014778930.1	ncRNA:24   UCA-GGGAUUUGAAAAGUAAAGACA   1   |||-===|*|=|||||||||||||| targets:808   AGUGUUUUCAGCUUUUCAUUUCUGU   832 Target Full Sequence	3.0	PREDICTED: Glycine max magnesium-transporting ATPase, P-type 1-like (LOC100778221), transcript variant X1, mRNA	magnesium-transporting ATPase, P-type 1-like(LOC100778221)	coding protein	psRNATarget
XM_014773179.1	ncRNA:24   UCAGGGAUUUGAAAAGUAAAGACA   1   *|*===|=|=|||||||||||||| targets:663   UGAUUUUGAGCUUUUCAUUUCUGU   686 Target Full Sequence	3.0	PREDICTED: Glycine max two-component response regulator-like PRR37 (LOC100785796), mRNA	two-component response regulator-like PRR37(LOC100785796)	coding protein	psRNATarget