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BaseInfo

ncRNA ID novel_gma_miR4310
Species Glycine max
Class miRNA
Genome position Chr13:12100653-12100870 [+]
Reference genome Glycine_max_v2.0
Source SRR2045230;SRR1295522
Length 24
Mature sequence(if miRNA) 195 - UAAACACGAACAAGGCCUGGGUCC - 218
Stem-loop(if miRNA) --                     U    A      C       C        C  CAUAAUU      AC       G A   UA    A   C   A    UUAUUUU
  ACCUAGGCCUUGUUUGUGUUU GGCA ACUAUG UAACAUG ACCACUUU CU       AAAAUA  AGUAAGA U AAU  UUAU UUU UAU AGCU       C
  ||||||||||||||||||||| |||| |||||| ||||||| |||||||| ||       ||||||  ||||||| | |||  |||| ||| ||| ||||
  UGGGUCCGGAACAAGCACAAA CCGU UGAUAC AUUGUAC UGGUGAAA GA       UUUUAU  UCAUUCU A UUA  AAUA AAA AUA UCGA       A
CC                     U    A      A       C        A  UCAUAAC      AC       G C   CA    G   A   G    CUUUUAU
Stem-loop sequence ACCUAGGCCUUGUUUGUGUUUUGGCAAACUAUGCUAACAUGCACCACUUUCCUCAUAAUUAAAAUAACAGUAAGAGUAAAUUAUUAUAUUUCUAUAAGCUUUAUUUUCAUAUUUUCAGCUGAUAAAAAGAUAAACAUUCAGUCUUACUCAUAUUUUCAAUACUAGAAAAGUGGUCCAUGUUAACAUAGUAUGCCUAAACACGAACAAGGCCUGGGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556525.3
ncRNA:24   CCUGGGUCCGGAACAAGCACAAAU   1
  |||||=|||||||||||||||||*
targets:860   GGACCUAGGCCUUGUUCGUGUUUU   883

2.0 PREDICTED: Glycine max UPF0061 protein azo1574 (LOC100817183), mRNA UPF0061 protein azo1574(LOC100817183) coding protein psRNATarget