ncRNA ID | novel_gma_miR4309 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:28931722-28931853 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045230;SRR2045232;SRR1295522 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAAAAAUUGCAACUAUAGGGACC - 24 |
Stem-loop(if miRNA) |
--UG             G         -A    A  C C                CUA      UAAA     CUUAUAGUUGCAA UUUUUAAUC  UUUG GU C CACUGUCUAAAAUCAU   AUGUUU    G     ||||||||||||| |||||||||  |||| || | ||||||||||||||||   ||||||     GGAUAUCAACGUU AAAAAUUGG  AAAC CA G GUGACAGAUUUUAGUA   UGUAGG    G CCAG             A         GA    -  U A                --A      UCUA |
Stem-loop sequence | UGCUUAUAGUUGCAAGUUUUUAAUCAUUUGAGUCCCCACUGUCUAAAAUCAUCUAAUGUUUUAAAGGAUCUGGAUGUAAUGAUUUUAGACAGUGAGUACCAAAAGGGUUAAAAAAUUGCAACUAUAGGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544626.3 |
|
2.0 | PREDICTED: Glycine max macro domain-containing protein XCC3184 (LOC100811169), transcript variant X1, mRNA | macro domain-containing protein XCC3184(LOC100811169) | coding protein | psRNATarget | |||||||||
BT093765.1 |
|
3.0 | Soybean clone JCVI-FLGm-24K14 unknown mRNA | NA | coding protein | psRNATarget |