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BaseInfo

ncRNA ID novel_gma_miR4309
Species Glycine max
Class miRNA
Genome position Chr10:28931722-28931853 [-]
Reference genome Glycine_max_v2.0
Source SRR2045230;SRR2045232;SRR1295522
Length 24
Mature sequence(if miRNA) 1 - UAAAAAAUUGCAACUAUAGGGACC - 24
Stem-loop(if miRNA) --UG             G         -A    A  C C                CUA      UAAA
    CUUAUAGUUGCAA UUUUUAAUC  UUUG GU C CACUGUCUAAAAUCAU   AUGUUU    G
    ||||||||||||| |||||||||  |||| || | ||||||||||||||||   ||||||
    GGAUAUCAACGUU AAAAAUUGG  AAAC CA G GUGACAGAUUUUAGUA   UGUAGG    G
CCAG             A         GA    -  U A                --A      UCUA
Stem-loop sequence UGCUUAUAGUUGCAAGUUUUUAAUCAUUUGAGUCCCCACUGUCUAAAAUCAUCUAAUGUUUUAAAGGAUCUGGAUGUAAUGAUUUUAGACAGUGAGUACCAAAAGGGUUAAAAAAUUGCAACUAUAGGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544626.3
ncRNA:24   CCAGGGAUAUCAACGUUAAAAAAU   1
  |||--*|||||||||||||||||*
targets:992   GGU--GUAUAGUUGCAAUUUUUUU   1013

2.0 PREDICTED: Glycine max macro domain-containing protein XCC3184 (LOC100811169), transcript variant X1, mRNA macro domain-containing protein XCC3184(LOC100811169) coding protein psRNATarget
BT093765.1
ncRNA:24   CCA-GGGAUAUCAACGUUAAAAAAU   1
  *||-|=||*||*||||||||||||=
targets:208   UGUACUCUUUAUUUGCAAUUUUUUG   232

3.0 Soybean clone JCVI-FLGm-24K14 unknown mRNA NA coding protein psRNATarget