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BaseInfo

ncRNA ID	novel_gma_miR4308
Species	Glycine max
Class	miRNA
Genome position	Chr13:22221515-22221650 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2045230;SRR2045232;SRR2045238;SRR1295522;SRR1294478
Length	24
Mature sequence(if miRNA)	1 - UUAGAGAACAAUACCAAAAGCACC - 24
Stem-loop(if miRNA)	--     A          G        A    A U          UA        ---------   G  CU   UGCUU UGGUGUUGUU UCUAAUCA AAUU G GUUUUAUCUC  UAAUCUAU         GUU AC  U   ||||| |||||||||| |||||||| |||| | ||||||||||  ||||||||         ||| ||  U   ACGAA ACCAUAACAA AGAUUAGU UUAA C CAAAAUGGAG  AUUGGGUG         CAA UG  G CC     A          G        C    C U          CC        UGUUAUUUC   G  CA
Stem-loop sequence	UGCUUAUGGUGUUGUUGUCUAAUCAAAAUUAGUGUUUUAUCUCUAUAAUCUAUGUUGACCUUUGACGUGAACCUUUAUUGUGUGGGUUACCGAGGUAAAACUCCAAUUCUGAUUAGAGAACAAUACCAAAAGCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768451.1	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *||||||*|||||||||||||||| targets:844   AGUGCUUGUGGUAUUGUUCUCUAA   867 Target Full Sequence	1.0	PREDICTED: Glycine max protein LURP-one-related 10-like (LOC100809404), transcript variant X4, mRNA	protein LURP-one-related 10-like(LOC100809404)	coding protein	psRNATarget
XM_006599023.2	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *||||||*|||||||||||||||| targets:844   AGUGCUUGUGGUAUUGUUCUCUAA   867 Target Full Sequence	1.0	PREDICTED: Glycine max protein LURP-one-related 10-like (LOC102661753), mRNA	protein LURP-one-related 10-like(LOC102661753)	coding protein	psRNATarget
XM_014768449.1	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *||||||*|||||||||||||||| targets:1104   AGUGCUUGUGGUAUUGUUCUCUAA   1127 Target Full Sequence	1.0	PREDICTED: Glycine max protein LURP-one-related 10-like (LOC100809404), transcript variant X2, mRNA	protein LURP-one-related 10-like(LOC100809404)	coding protein	psRNATarget
XM_014768450.1	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *||||||*|||||||||||||||| targets:1105   AGUGCUUGUGGUAUUGUUCUCUAA   1128 Target Full Sequence	1.0	PREDICTED: Glycine max protein LURP-one-related 10-like (LOC100809404), transcript variant X3, mRNA	protein LURP-one-related 10-like(LOC100809404)	coding protein	psRNATarget
XM_014768448.1	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *||||||*|||||||||||||||| targets:1135   AGUGCUUGUGGUAUUGUUCUCUAA   1158 Target Full Sequence	1.0	PREDICTED: Glycine max protein LURP-one-related 10-like (LOC100809404), transcript variant X1, mRNA	protein LURP-one-related 10-like(LOC100809404)	coding protein	psRNATarget
XM_006585935.2	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   |||||||||||||||||||||*|| targets:416   GGUGCUUUUGGUAUUGUUCUCCAA   439 Target Full Sequence	1.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_006585934.2	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   |||||||||||||||||||||*|| targets:416   GGUGCUUUUGGUAUUGUUCUCCAA   439 Target Full Sequence	1.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_003555401.3	ncRNA:24   CCACGAAAACCAUAACAAGAGAUU   1   *|||=||||*||||||||||=||| targets:874   AGUGUUUUUAGUAUUGUUCUUUAA   897 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor WER-like (LOC100780809), mRNA	transcription factor WER-like(LOC100780809)	coding protein	psRNATarget
XM_014766050.1	ncRNA:24   CCAC-GAAAACCAUAACAAGAGAUU   1   ||||-|||**||||||||||||||* targets:772   GGUGACUUCCGGUAUUGUUCUCUAU   796 Target Full Sequence	3.0	PREDICTED: Glycine max dolichol kinase EVAN-like (LOC100799242), transcript variant X2, mRNA	dolichol kinase EVAN-like(LOC100799242)	coding protein	psRNATarget
XM_003543405.2	ncRNA:24   CCAC-GAAAACCAUAACAAGAGAUU   1   ||||-|||**||||||||||||||* targets:770   GGUGACUUCCGGUAUUGUUCUCUAU   794 Target Full Sequence	3.0	PREDICTED: Glycine max dolichol kinase EVAN-like (LOC100799242), transcript variant X1, mRNA	dolichol kinase EVAN-like(LOC100799242)	coding protein	psRNATarget
XM_003539381.3	ncRNA:24   CCAC-GAAAACCAUAACAAGAGAUU   1   ||||-|||**||||||||||||||* targets:956   GGUGACUUCCGGUAUUGUUCUCUAU   980 Target Full Sequence	3.0	PREDICTED: Glycine max dolichol kinase EVAN-like (LOC100793756), transcript variant X1, mRNA	dolichol kinase EVAN-like(LOC100793756)	coding protein	psRNATarget
XM_014764989.1	ncRNA:24   CCAC-GAAAACCAUAACAAGAGAUU   1   ||||-|||**||||||||||||||* targets:961   GGUGACUUCCGGUAUUGUUCUCUAU   985 Target Full Sequence	3.0	PREDICTED: Glycine max dolichol kinase EVAN-like (LOC100793756), transcript variant X2, mRNA	dolichol kinase EVAN-like(LOC100793756)	coding protein	psRNATarget