ncRNA ID | novel_gma_miR4299 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:5675285-5675410 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045230 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCUGAUAGGAGAACGACACC - 21 |
Stem-loop(if miRNA) |
--     C  A  A    A           CAG             AUAAUAAA      -      UGUUG UC CU AUCA AAUUGGAGUUU   CUCAGUAAUCUAU        GGUUUG CAUU   ||||| || || |||| |||||||||||   |||||||||||||        |||||| |||A   ACAGC AG GG UAGU UUAAUCUCAAA   GAGUCAUUAGAUA        UCGAAC GUAA CC     A  A  A    C           AUA             --CAACUG      U    |
Stem-loop sequence | UGUUGCUCACUAAUCAAAAUUGGAGUUUCAGCUCAGUAAUCUAUAUAAUAAAGGUUUGCAUUAAAUGUCAAGCUGUCAACAUAGAUUACUGAGAUAAAACUCUAAUUCUGAUAGGAGAACGACACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544488.3 |
|
1.0 | PREDICTED: Glycine max delta(8)-fatty-acid desaturase 2-like (LOC100775880), mRNA | delta(8)-fatty-acid desaturase 2-like(LOC100775880) | coding protein | psRNATarget | |||||||||
XM_003550220.3 |
|
2.0 | PREDICTED: Glycine max delta(8)-fatty-acid desaturase 2-like (LOC100776476), mRNA | delta(8)-fatty-acid desaturase 2-like(LOC100776476) | coding protein | psRNATarget |