ncRNA ID | novel_gma_miR4298 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:11680281-11680391 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045230;SRR2045232;SRR2045236;SRR1295522 |
Length | 24 |
Mature sequence(if miRNA) | 88 - UUUGAAAGUGCUUGUACAGGGACU - 111 |
Stem-loop(if miRNA) |
--     U                    ----------A         AAAUG  AAGG   A   UUCCU UACAAGCACUUUCAGGUCCU           GCCGUUACA     AC    ACU A   ||||| ||||||||||||||||||||           |||||||||     ||    |||   AGGGA AUGUUCGUGAAAGUUUAGGG           UGGCAAUGU     UG    UGG A UC     C                    AAAACUAGGGG         ----A  -AAA   A |
Stem-loop sequence | UUCCUUUACAAGCACUUUCAGGUCCUAGCCGUUACAAAAUGACAAGGACUAAAAGGUAAAGUAUGUAACGGUGGGGAUCAAAAGGGAUUUGAAAGUGCUUGUACAGGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524624.3 |
|
2.5 | PREDICTED: Glycine max metal transporter Nramp3-like (LOC100812381), mRNA | metal transporter Nramp3-like(LOC100812381) | coding protein | psRNATarget |