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BaseInfo

ncRNA ID novel_gma_miR4298
Species Glycine max
Class miRNA
Genome position Chr6:11680281-11680391 [+]
Reference genome Glycine_max_v2.0
Source SRR2045230;SRR2045232;SRR2045236;SRR1295522
Length 24
Mature sequence(if miRNA) 88 - UUUGAAAGUGCUUGUACAGGGACU - 111
Stem-loop(if miRNA) --     U                    ----------A         AAAUG  AAGG   A
  UUCCU UACAAGCACUUUCAGGUCCU           GCCGUUACA     AC    ACU A
  ||||| ||||||||||||||||||||           |||||||||     ||    |||
  AGGGA AUGUUCGUGAAAGUUUAGGG           UGGCAAUGU     UG    UGG A
UC     C                    AAAACUAGGGG         ----A  -AAA   A
Stem-loop sequence UUCCUUUACAAGCACUUUCAGGUCCUAGCCGUUACAAAAUGACAAGGACUAAAAGGUAAAGUAUGUAACGGUGGGGAUCAAAAGGGAUUUGAAAGUGCUUGUACAGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524624.3
ncRNA:24   UCAGGGACAUGUUCGUGAAAGUUU   1
  ||-|*|||||=*||||||||||||
targets:1818   AG-CGCUGUAUUAGCACUUUCAAA   1840

2.5 PREDICTED: Glycine max metal transporter Nramp3-like (LOC100812381), mRNA metal transporter Nramp3-like(LOC100812381) coding protein psRNATarget