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BaseInfo

ncRNA ID novel_gma_miR4291
Species Glycine max
Class miRNA
Genome position Chr11:22411621-22411745 [+]
Reference genome Glycine_max_v2.0
Source SRR2045230
Length 24
Mature sequence(if miRNA) 1 - AAAAAACCGAUGUUAACUAGAACU - 24
Stem-loop(if miRNA) --AAAA              A A                A          C       UUAG
      AACCGAUGUUAACU G ACUAACAACAUCGGUU UUUAAAAAAU GAUGUUG    U
      |||||||||||||| | |||||||||||||||| |||||||||| |||||||    U
      UUGGCUACAAUUGA C UGAUUGUUGUAGCCAA AAAUUUUUUG CUACAAU    C
AAUUUA              C G                A          A       UAAC
Stem-loop sequence AAAAAACCGAUGUUAACUAGAACUAACAACAUCGGUUAUUUAAAAAAUCGAUGUUGUUAGUUCCAAUUAACAUCAGUUUUUUAAAAAACCGAUGUUGUUAGUGCCAGUUAACAUCGGUUAUUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006588741.2
ncRNA:24   UCAAGAUCAAUUGUAGCCAAAAAA   1
  *|||-|=|||||||||||||||*|
targets:2928   UGUU-UGGUUAACAUCGGUUUUGU   2950

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA phosphoinositide phosphatase SAC1-like(LOC102670366) coding protein psRNATarget
XM_014763017.1
ncRNA:24   UCAAGAUCAAUUGUAGCCAAAAAA   1
  *|||-|=|||||||||||||||*|
targets:3024   UGUU-UGGUUAACAUCGGUUUUGU   3046

2.5 PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA phosphoinositide phosphatase SAC1-like(LOC102660101) coding protein psRNATarget