ncRNA ID | novel_gma_miR4291 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:22411621-22411745 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045230 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAAACCGAUGUUAACUAGAACU - 24 |
Stem-loop(if miRNA) |
--AAAA              A A                A          C       UUAG       AACCGAUGUUAACU G ACUAACAACAUCGGUU UUUAAAAAAU GAUGUUG    U       |||||||||||||| | |||||||||||||||| |||||||||| |||||||    U       UUGGCUACAAUUGA C UGAUUGUUGUAGCCAA AAAUUUUUUG CUACAAU    C AAUUUA              C G                A          A       UAAC |
Stem-loop sequence | AAAAAACCGAUGUUAACUAGAACUAACAACAUCGGUUAUUUAAAAAAUCGAUGUUGUUAGUUCCAAUUAACAUCAGUUUUUUAAAAAACCGAUGUUGUUAGUGCCAGUUAACAUCGGUUAUUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588741.2 |
|
2.5 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA | phosphoinositide phosphatase SAC1-like(LOC102670366) | coding protein | psRNATarget | |||||||||
XM_014763017.1 |
|
2.5 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA | phosphoinositide phosphatase SAC1-like(LOC102660101) | coding protein | psRNATarget |